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There are 13358 results for: content related to: Index

  1. Improving threading algorithms for remote homology modeling by combining fragment and template comparisons

    Proteins: Structure, Function, and Bioinformatics

    Volume 78, Issue 9, July 2010, Pages: 2041–2048, Hongyi Zhou and Jeffrey Skolnick

    Article first published online : 18 MAR 2010, DOI: 10.1002/prot.22717

  2. Template-based protein structure modeling using TASSERVMT

    Proteins: Structure, Function, and Bioinformatics

    Volume 80, Issue 2, February 2012, Pages: 352–361, Hongyi Zhou and Jeffrey Skolnick

    Article first published online : 22 NOV 2011, DOI: 10.1002/prot.23183

  3. Tasser-Based Protein Structure Prediction

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Shashi Bhushan Pandit, Hongyi Zhou, Jeffrey Skolnick, Pages: 219–242, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch10

  4. Template Based Prediction of Three-Dimensional Protein Structures: Fold Recognition and Comparative Modeling

    Prediction of Protein Structures, Functions, and Interactions

    Jan Kosiński, Karolina L. Tkaczuk, Joanna M. Kasprzak, Janusz M. Bujnicki, Pages: 87–116, 2008

    Published Online : 18 DEC 2008, DOI: 10.1002/9780470741894.ch4

  5. Protein Fold Recognition Based on Distant Homologs

    Bioinformatics - From Genomes to Therapies

    Thomas Lengauer, Pages: 351–388, 2008

    Published Online : 5 FEB 2008, DOI: 10.1002/9783527619368.ch11

  6. A Survey of Remote Homology Detection and Fold Recognition Methods

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Huzefa Rangwala, George Karypis, Pages: 165–194, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch8

  7. Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade

    Proteins: Structure, Function, and Bioinformatics

    Jianyi Yang, Wenxuan Zhang, Baoji He, Sara Elizabeth Walker, Hongjiu Zhang, Brandon Govindarajoo, Jouko Virtanen, Zhidong Xue, Hong-Bin Shen and Yang Zhang

    Article first published online : 18 SEP 2015, DOI: 10.1002/prot.24918

  8. Protein model quality assessment prediction by combining fragment comparisons and a consensus Cα contact potential

    Proteins: Structure, Function, and Bioinformatics

    Volume 71, Issue 3, 15 May 2008, Pages: 1211–1218, Hongyi Zhou and Jeffrey Skolnick

    Article first published online : 14 NOV 2007, DOI: 10.1002/prot.21813

  9. Modeling and Validation of Transmembrane Protein Structures

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Maya Schushan, Nir Ben-Tal, Pages: 369–401, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch17

  10. Massive integration of diverse protein quality assessment methods to improve template based modeling in CASP11

    Proteins: Structure, Function, and Bioinformatics

    Renzhi Cao, Debswapna Bhattacharya, Badri Adhikari, Jilong Li and Jianlin Cheng

    Article first published online : 29 SEP 2015, DOI: 10.1002/prot.24924

  11. You have free access to this content
    Use of a structural alphabet to find compatible folds for amino acid sequences

    Protein Science

    Volume 24, Issue 1, January 2015, Pages: 145–153, Swapnil Mahajan, Alexandre G. de Brevern, Yves-Henri Sanejouand, Narayanaswamy Srinivasan and Bernard Offmann

    Article first published online : 25 OCT 2014, DOI: 10.1002/pro.2581

  12. Template based protein structure modeling by global optimization in CASP11

    Proteins: Structure, Function, and Bioinformatics

    Keehyoung Joo, InSuk Joung, Sun Young Lee, Jong Yun Kim, Qianyi Cheng, Balachandran Manavalan, Jong Young Joung, Seungryong Heo, Juyong Lee, Mikyung Nam, In-Ho Lee, Sung Jong Lee and Jooyoung Lee

    Article first published online : 14 SEP 2015, DOI: 10.1002/prot.24917

  13. You have free access to this content
    Index

    Structural Bioinformatics, Volume 44

    Philip E. Bourne, Helge Weissig, Pages: 613–649, 2005

    Published Online : 28 JAN 2005, DOI: 10.1002/0471721204.index

  14. Computational modeling of membrane proteins

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 1, January 2015, Pages: 1–24, Julia Koehler Leman, Martin B. Ulmschneider and Jeffrey J. Gray

    Article first published online : 19 NOV 2014, DOI: 10.1002/prot.24703

  15. Integrative Protein Fold Recognition by Alignments and Machine Learning

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Allison N. Tegge, Zheng Wang, Jianlin Cheng, Pages: 195–218, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch9

  16. Model Quality Prediction

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Huzefa Rangwala, George Karypis, Pages: 323–342, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch15

  17. Fold recognition by concurrent use of solvent accessibility and residue depth

    Proteins: Structure, Function, and Bioinformatics

    Volume 68, Issue 3, 15 August 2007, Pages: 636–645, Song Liu, Chi Zhang, Shide Liang and Yaoqi Zhou

    Article first published online : 17 MAY 2007, DOI: 10.1002/prot.21459

  18. Assessment of template-based modeling of protein structure in CASP11

    Proteins: Structure, Function, and Bioinformatics

    Accepted manuscript online: 15 APR 2016, Vivek Modi, Qifang Xu, Sam Adhikari and Roland L. Dunbrack

    DOI: 10.1002/prot.25049

  19. Detecting local residue environment similarity for recognizing near-native structure models

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 12, December 2014, Pages: 3255–3272, Hyungrae Kim and Daisuke Kihara

    Article first published online : 30 OCT 2014, DOI: 10.1002/prot.24658

  20. Model Quality Assessment Using a Statistical Program that Adopts a Side Chain Environment Viewpoint

    Introduction to Protein Structure Prediction: Methods and Algorithms

    Genki Terashi, Mayuko Takeda-Shitaka, Kazuhiko Kanou, Hideaki Umeyama, Pages: 299–321, 2010

    Published Online : 7 SEP 2010, DOI: 10.1002/9780470882207.ch14