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There are 24536 results for: content related to: On the centrality of vertices of molecular graphs

  1. Common vertex matrix: A novel characterization of molecular graphs by counting

    Journal of Computational Chemistry

    Volume 34, Issue 16, 15 June 2013, Pages: 1409–1419, Milan Randić, Marjana Novič and Dejan Plavšić

    Version of Record online : 26 APR 2013, DOI: 10.1002/jcc.23300

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    Modeling biophysical and biological properties from the characteristics of the molecular electron density, electron localization and delocalization matrices, and the electrostatic potential

    Journal of Computational Chemistry

    Volume 35, Issue 16, 15 June 2014, Pages: 1165–1198, Chérif F. Matta

    Version of Record online : 28 APR 2014, DOI: 10.1002/jcc.23608

  3. Is the DPT tautomerization of the long A·G Watson–Crick DNA base mispair a source of the adenine and guanine mutagenic tautomers? A QM and QTAIM response to the biologically important question

    Journal of Computational Chemistry

    Volume 35, Issue 6, 5 March 2014, Pages: 451–466, Ol'ha O. Brovarets', Roman O. Zhurakivsky and Dmytro M. Hovorun

    Version of Record online : 30 DEC 2013, DOI: 10.1002/jcc.23515

  4. Atomistic understanding of the C·T mismatched DNA base pair tautomerization via the DPT: QM and QTAIM computational approaches

    Journal of Computational Chemistry

    Volume 34, Issue 30, 15 November 2013, Pages: 2577–2590, Ol'ha O. Brovarets' and Dmytro M. Hovorun

    Version of Record online : 16 AUG 2013, DOI: 10.1002/jcc.23412

  5. Reparameterizations of the χ Torsion and Lennard-Jones σ Parameters Improve the Conformational Characteristics of Modified Uridines

    Journal of Computational Chemistry

    Volume 37, Issue 17, June 30, 2016, Pages: 1576–1588, Indrajit Deb, Rupak Pal, Joanna Sarzynska and Ansuman Lahiri

    Version of Record online : 30 MAR 2016, DOI: 10.1002/jcc.24374

  6. Libra: An open-Source “methodology discovery” library for quantum and classical dynamics simulations

    Journal of Computational Chemistry

    Volume 37, Issue 17, June 30, 2016, Pages: 1626–1649, Alexey V. Akimov

    Version of Record online : 26 MAR 2016, DOI: 10.1002/jcc.24367

  7. Free energies of solvation in the context of protein folding: Implications for implicit and explicit solvent models

    Journal of Computational Chemistry

    Volume 37, Issue 7, March 15, 2016, Pages: 629–640, Alexander Cumberworth, Jennifer M. Bui and Jörg Gsponer

    Version of Record online : 12 NOV 2015, DOI: 10.1002/jcc.24235

  8. State-specific multireference perturbation theory with improved virtual orbitals: Taming the ground state of F2, Be2, and N2

    Journal of Computational Chemistry

    Volume 36, Issue 12, May 5, 2015, Pages: 907–925, Sudip Chattopadhyay, Rajat K. Chaudhuri and Uttam Sinha Mahapatra

    Version of Record online : 5 MAR 2015, DOI: 10.1002/jcc.23873

  9. Relativistic state-specific multireference perturbation theory incorporating improved virtual orbitals: Application to the ground state single-bond dissociation

    Journal of Computational Chemistry

    Volume 36, Issue 26, October 5, 2015, Pages: 1954–1972, Anirban Ghosh, Rajat K. Chaudhuri, Sudip Chattopadhyay and Uttam Sinha Mahapatra

    Version of Record online : 13 AUG 2015, DOI: 10.1002/jcc.24037

  10. Ab initio path-integral calculations of kinetic and equilibrium isotope effects on base-catalyzed RNA transphosphorylation models

    Journal of Computational Chemistry

    Volume 35, Issue 17, 30 June 2014, Pages: 1302–1316, Kin-Yiu Wong, Yuqing Xu and Darrin M. York

    Version of Record online : 20 MAY 2014, DOI: 10.1002/jcc.23628

  11. Analytic derivatives for the XYG3 type of doubly hybrid density functionals: Theory, implementation, and assessment

    Journal of Computational Chemistry

    Volume 34, Issue 20, 30 July 2013, Pages: 1759–1774, Neil Qiang Su, Igor Ying Zhang and Xin Xu

    Version of Record online : 16 MAY 2013, DOI: 10.1002/jcc.23312

  12. Multidimensional persistence in biomolecular data

    Journal of Computational Chemistry

    Volume 36, Issue 20, July 30, 2015, Pages: 1502–1520, Kelin Xia and Guo-Wei Wei

    Version of Record online : 30 MAY 2015, DOI: 10.1002/jcc.23953

  13. DOCK 6: Impact of new features and current docking performance

    Journal of Computational Chemistry

    Volume 36, Issue 15, June 5, 2015, Pages: 1132–1156, William J. Allen, Trent E. Balius, Sudipto Mukherjee, Scott R. Brozell, Demetri T. Moustakas, P. Therese Lang, David A. Case, Irwin D. Kuntz and Robert C. Rizzo

    Version of Record online : 27 APR 2015, DOI: 10.1002/jcc.23905

  14. The role of the long-range exchange corrections in the description of electron delocalization in aromatic species

    Journal of Computational Chemistry

    Volume 38, Issue 18, July 5, 2017, Pages: 1640–1654, Dariusz W. Szczepanik, Miquel Solà, Marcin Andrzejak, Barbara Pawełek, Justyna Dominikowska, Mercedes Kukułka, Karol Dyduch, Tadeusz M. Krygowski and Halina Szatylowicz

    Version of Record online : 24 APR 2017, DOI: 10.1002/jcc.24805

  15. Highly asymmetric electrolytes in the primitive model: Hypernetted chain solution in arbitrary spatial dimensions

    Journal of Computational Chemistry

    Volume 35, Issue 4, 5 February 2014, Pages: 275–289, Marco Heinen, Elshad Allahyarov and Hartmut Löwen

    Version of Record online : 9 OCT 2013, DOI: 10.1002/jcc.23446

  16. Molcas 8: New capabilities for multiconfigurational quantum chemical calculations across the periodic table

    Journal of Computational Chemistry

    Volume 37, Issue 5, February 15, 2016, Pages: 506–541, Francesco Aquilante, Jochen Autschbach, Rebecca K. Carlson, Liviu F. Chibotaru, Mickaël G. Delcey, Luca De Vico, Ignacio Fdez. Galván, Nicolas Ferré, Luis Manuel Frutos, Laura Gagliardi, Marco Garavelli, Angelo Giussani, Chad E. Hoyer, Giovanni Li Manni, Hans Lischka, Dongxia Ma, Per Åke Malmqvist, Thomas Müller, Artur Nenov, Massimo Olivucci, Thomas Bondo Pedersen, Daoling Peng, Felix Plasser, Ben Pritchard, Markus Reiher, Ivan Rivalta, Igor Schapiro, Javier Segarra-Martí, Michael Stenrup, Donald G. Truhlar, Liviu Ungur, Alessio Valentini, Steven Vancoillie, Valera Veryazov, Victor P. Vysotskiy, Oliver Weingart, Felipe Zapata and Roland Lindh

    Version of Record online : 12 NOV 2015, DOI: 10.1002/jcc.24221

  17. Revision of the GROMOS 56A6CARBO force field: Improving the description of ring-conformational equilibria in hexopyranose-based carbohydrates chains

    Journal of Computational Chemistry

    Volume 37, Issue 3, January 30, 2016, Pages: 354–365, Wojciech Plazinski, Alice Lonardi and Philippe H. Hünenberger

    Version of Record online : 3 NOV 2015, DOI: 10.1002/jcc.24229

  18. Application of a BOSS—Gaussian interface for QM/MM simulations of Henry and methyl transfer reactions

    Journal of Computational Chemistry

    Volume 36, Issue 27, October 15, 2015, Pages: 2064–2074, Jonah Z. Vilseck, Jakub Kostal, Julian Tirado-Rives and William L. Jorgensen

    Version of Record online : 27 AUG 2015, DOI: 10.1002/jcc.24045

  19. Combined quantum-mechanical molecular mechanics calculations with NWChem and AMBER: Excited state properties of green fluorescent protein chromophore analogue in aqueous solution

    Journal of Computational Chemistry

    Volume 38, Issue 18, July 5, 2017, Pages: 1631–1639, Teerapong Pirojsirikul, Andreas W. Götz, John Weare, Ross C. Walker, Karol Kowalski and Marat Valiev

    Version of Record online : 3 MAY 2017, DOI: 10.1002/jcc.24804

  20. Distinguishing between keto–enol and acid–base forms of firefly oxyluciferin through calculation of excited-state equilibrium constants

    Journal of Computational Chemistry

    Volume 35, Issue 30, November 15, 2014, Pages: 2184–2194, Olle Falklöf and Bo Durbeej

    Version of Record online : 16 SEP 2014, DOI: 10.1002/jcc.23735