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There are 1675 results for: content related to: LFQ uant: A label-free fast quantitative analysis tool for high-resolution LC - MS / MS proteomics data

  1. Workflow for analysis of high mass accuracy salivary data set using MaxQuant and ProteinPilot search algorithm

    PROTEOMICS

    Volume 12, Issue 11, June 2012, Pages: 1726–1730, Pratik Jagtap, Sricharan Bandhakavi, LeeAnn Higgins, Thomas McGowan, Rongxiao Sa, Matthew D. Stone, John Chilton, Edgar A. Arriaga, Sean L. Seymour and Timothy J. Griffin

    Version of Record online : 27 JUN 2012, DOI: 10.1002/pmic.201100097

  2. pParse: A method for accurate determination of monoisotopic peaks in high-resolution mass spectra

    PROTEOMICS

    Volume 12, Issue 2, No. 2 January 2012, Pages: 226–235, Zuo-F ei Yuan, Chao Liu, Hai-Peng Wang, Rui-Xiang Sun, Yan Fu, Jing-Fen Zhang, Le-Heng Wang, Hao Chi, You Li, Li-Yun Xiu, Wen-Ping Wang and Si-Min He

    Version of Record online : 20 DEC 2011, DOI: 10.1002/pmic.201100081

  3. MZDASoft: a software architecture that enables large-scale comparison of protein expression levels over multiple samples based on liquid chromatography/tandem mass spectrometry

    Rapid Communications in Mass Spectrometry

    Volume 29, Issue 19, 15 October 2015, Pages: 1841–1848, Mehrab Ghanat Bari, Nelson Ramirez, Zhiwei Wang and Jianqiu (Michelle) Zhang

    Version of Record online : 25 AUG 2015, DOI: 10.1002/rcm.7272

  4. Label-free quantitative proteomic analysis of human plasma-derived microvesicles to find protein signatures of abdominal aortic aneurysms

    PROTEOMICS - Clinical Applications

    Volume 8, Issue 7-8, August 2014, Pages: 620–625, Roxana Martinez-Pinna, Anne Gonzalez de Peredo, Bernard Monsarrat, Odile Burlet-Schiltz and Jose Luis Martin-Ventura

    Version of Record online : 15 AUG 2014, DOI: 10.1002/prca.201400010

  5. Polymorphism-aware protein databases –a pre-requisite for an unbiased proteomic analysis of natural populations

    Molecular Ecology Resources

    Accepted manuscript online: 28 JAN 2017, Kathrin A. Otte and Christian Schlötterer

    DOI: 10.1111/1755-0998.12656

  6. You have full text access to this OnlineOpen article
    Visualization of LC-MS/MS proteomics data in MaxQuant

    PROTEOMICS

    Volume 15, Issue 8, April 2015, Pages: 1453–1456, Stefka Tyanova, Tikira Temu, Arthur Carlson, Pavel Sinitcyn, Matthias Mann and Juergen Cox

    Version of Record online : 5 MAR 2015, DOI: 10.1002/pmic.201400449

  7. Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline

    PROTEOMICS

    Volume 11, Issue 14, No. 14 July 2011, Pages: 2790–2797, David C. Trudgian, Gabriela Ridlova, Roman Fischer, Mukram M. Mackeen, Nicola Ternette, Oreste Acuto, Benedikt M. Kessler and Benjamin Thomas

    Version of Record online : 8 JUN 2011, DOI: 10.1002/pmic.201000800

  8. You have full text access to this OnlineOpen article
    The mzqLibrary – An open source Java library supporting the HUPO-PSI quantitative proteomics standard

    PROTEOMICS

    Volume 15, Issue 18, September 2015, Pages: 3152–3162, Da Qi, Huaizhong Zhang, Jun Fan, Simon Perkins, Addolorata Pisconti, Deborah M. Simpson, Conrad Bessant, Simon Hubbard and Andrew R. Jones

    Version of Record online : 14 JUL 2015, DOI: 10.1002/pmic.201400535

  9. Global quantitative proteomics reveals novel factors in the ecdysone signaling pathway in Drosophila melanogaster

    PROTEOMICS

    Volume 15, Issue 4, February 2015, Pages: 725–738, Karen A. Sap, Karel Bezstarosti, Dick H. W. Dekkers, Mirjam van den Hout, Wilfred van Ijcken, Erikjan Rijkers and Jeroen A. A. Demmers

    Version of Record online : 14 JAN 2015, DOI: 10.1002/pmic.201400308

  10. You have full text access to this OnlineOpen article
    Quantitative proteomics and network analysis of SSA1 and SSB1 deletion mutants reveals robustness of chaperone HSP70 network in Saccharomyces cerevisiae

    PROTEOMICS

    Volume 15, Issue 18, September 2015, Pages: 3126–3139, Andrew F. Jarnuczak, Claire E. Eyers, Jean-Marc Schwartz, Christopher M. Grant and Simon J. Hubbard

    Version of Record online : 10 APR 2015, DOI: 10.1002/pmic.201400527

  11. Improved bottom-up strategy to efficiently separate hypermodified histone peptides through ultra-HPLC separation on a bench top Orbitrap instrument

    PROTEOMICS

    Volume 14, Issue 19, October 2014, Pages: 2212–2225, Monica Soldi, Alessandro Cuomo and Tiziana Bonaldi

    Version of Record online : 28 AUG 2014, DOI: 10.1002/pmic.201400075

  12. Analysis of Drosophila melanogaster proteome dynamics during embryonic development by a combination of label-free proteomics approaches

    PROTEOMICS

    Volume 16, Issue 15-16, August 2016, Pages: 2068–2080, Bertrand Fabre, Dagmara Korona, Arnoud Groen, Jakob Vowinckel, Laurent Gatto, Michael J. Deery, Markus Ralser, Steven Russell and Kathryn S. Lilley

    Version of Record online : 10 MAY 2016, DOI: 10.1002/pmic.201500482

  13. Proteomic identification of nuclear processes manipulated by cytomegalovirus early during infection

    PROTEOMICS

    Volume 15, Issue 12, June 2015, Pages: 1995–2005, Dominique M. Carter, Kristen Westdorp, Kathleen R. Noon and Scott S. Terhune

    Version of Record online : 28 APR 2015, DOI: 10.1002/pmic.201400599

  14. LC-MS/MS-based serum proteomics for identification of candidate biomarkers for hepatocellular carcinoma

    PROTEOMICS

    Volume 15, Issue 13, July 2015, Pages: 2369–2381, Tsung-Heng Tsai, Ehwang Song, Rui Zhu, Cristina Di Poto, Minkun Wang, Yue Luo, Rency S. Varghese, Mahlet G. Tadesse, Dina Hazem Ziada, Chirag S. Desai, Kirti Shetty, Yehia Mechref and Habtom W. Ressom

    Version of Record online : 29 APR 2015, DOI: 10.1002/pmic.201400364

  15. Quantitative proteomics using SILAC: Principles, applications, and developments

    PROTEOMICS

    Volume 15, Issue 18, September 2015, Pages: 3175–3192, Xiulan Chen, Shasha Wei, Yanlong Ji, Xiaojing Guo and Fuquan Yang

    Version of Record online : 14 JUL 2015, DOI: 10.1002/pmic.201500108

  16. You have full text access to this OnlineOpen article
    Differential dynamics of the mammalian mRNA and protein expression response to misfolding stress

    Molecular Systems Biology

    Volume 12, Issue 1, January 2016, Zhe Cheng, Guoshou Teo, Sabrina Krueger, Tara M Rock, Hiromi WL Koh, Hyungwon Choi and Christine Vogel

    Version of Record online : 20 JAN 2016, DOI: 10.15252/msb.20156423

  17. Proteomic Analysis of Protein Deamidation

    Unit

    Current Protocols in Protein Science

    24:24.5.1–24.5.14

    Piliang Hao and Siu Kwan Sze

    Published Online : 3 NOV 2014, DOI: 10.1002/0471140864.ps2405s78

  18. In-depth characterization of the secretome of mouse CNS cell lines by LC-MS/MS without prefractionation

    PROTEOMICS

    Volume 15, Issue 21, November 2015, Pages: 3617–3622, Jongmin Woo, Dohyun Han, Joonho Park, Sang Jeong Kim and Youngsoo Kim

    Version of Record online : 7 SEP 2015, DOI: 10.1002/pmic.201400623

  19. Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities

    PROTEOMICS

    Volume 13, Issue 18-19, October 2013, Pages: 2786–2804, Jana Seifert, Florian-Alexander Herbst, Per Halkjær Nielsen, Francisco J. Planes, Nico Jehmlich, Manuel Ferrer and Martin von Bergen

    Version of Record online : 7 AUG 2013, DOI: 10.1002/pmic.201200566

  20. Molecular characterization and functional analyses of ZtWor1, a transcriptional regulator of the fungal wheat pathogen Zymoseptoria tritici

    Molecular Plant Pathology

    Volume 15, Issue 4, May 2014, Pages: 394–405, Amir Mirzadi Gohari, Rahim Mehrabi, Olivier Robert, Ikbal Agah Ince, Sjef Boeren, Martin Schuster, Gero Steinberg, Pierre J. G. M. de Wit and Gert H. J. Kema

    Version of Record online : 17 DEC 2013, DOI: 10.1111/mpp.12102