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There are 10007 results for: content related to: A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies

  1. Metaproteomic analysis using the Galaxy framework

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3553–3565, Pratik D. Jagtap, Alan Blakely, Kevin Murray, Shaun Stewart, Joel Kooren, James E. Johnson, Nelson L. Rhodus, Joel Rudney and Timothy J. Griffin

    Version of Record online : 24 JUL 2015, DOI: 10.1002/pmic.201500074

  2. Navigating through metaproteomics data: A logbook of database searching

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3439–3453, Thilo Muth, Carolin A. Kolmeder, Jarkko Salojärvi, Salla Keskitalo, Markku Varjosalo, Froukje J. Verdam, Sander S. Rensen, Udo Reichl, Willem M. de Vos, Erdmann Rapp and Lennart Martens

    Version of Record online : 27 APR 2015, DOI: 10.1002/pmic.201400560

  3. You have full text access to this OnlineOpen article
    A decade of metaproteomics: Where we stand and what the future holds

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3409–3417, Paul Wilmes, Anna Heintz-Buschart and Philip L. Bond

    Version of Record online : 10 SEP 2015, DOI: 10.1002/pmic.201500183

  4. Proteomics of the Roseobacter clade, a window to the marine microbiology landscape

    PROTEOMICS

    Volume 15, Issue 23-24, December 2015, Pages: 3928–3942, Joseph A. Christie-Oleza and Jean Armengaud

    Version of Record online : 23 NOV 2015, DOI: 10.1002/pmic.201500222

  5. You have full text access to this OnlineOpen article
    Metaproteomics of complex microbial communities in biogas plants

    Microbial Biotechnology

    Volume 8, Issue 5, September 2015, Pages: 749–763, Robert Heyer, Fabian Kohrs, Udo Reichl and Dirk Benndorf

    Version of Record online : 15 APR 2015, DOI: 10.1111/1751-7915.12276

  6. You have free access to this content
    Improving the quality of genome, protein sequence, and taxonomy databases: A prerequisite for microbiome meta-omics 2.0

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3418–3423, Olivier Pible and Jean Armengaud

    Version of Record online : 10 SEP 2015, DOI: 10.1002/pmic.201500104

  7. Enhancing metaproteomics—The value of models and defined environmental microbial systems

    PROTEOMICS

    Volume 16, Issue 5, March 2016, Pages: 783–798, Florian-Alexander Herbst, Vanessa Lünsmann, Henrik Kjeldal, Nico Jehmlich, Andreas Tholey, Martin von Bergen, Jeppe Lund Nielsen, Robert L. Hettich, Jana Seifert and Per Halkjær Nielsen

    Version of Record online : 21 JAN 2016, DOI: 10.1002/pmic.201500305

  8. Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3424–3438, Weili Xiong, Paul E. Abraham, Zhou Li, Chongle Pan and Robert L. Hettich

    Version of Record online : 28 MAY 2015, DOI: 10.1002/pmic.201400571

  9. Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities

    PROTEOMICS

    Volume 13, Issue 18-19, October 2013, Pages: 2786–2804, Jana Seifert, Florian-Alexander Herbst, Per Halkjær Nielsen, Francisco J. Planes, Nico Jehmlich, Manuel Ferrer and Martin von Bergen

    Version of Record online : 7 AUG 2013, DOI: 10.1002/pmic.201200566

  10. You have full text access to this OnlineOpen article
    Proteogenomics in microbiology: Taking the right turn at the junction of genomics and proteomics

    PROTEOMICS

    Volume 14, Issue 23-24, December 2014, Pages: 2360–2675, Veronika Kucharova and Harald G. Wiker

    Version of Record online : 19 NOV 2014, DOI: 10.1002/pmic.201400168

  11. You have full text access to this OnlineOpen article
    Exploring mixed microbial community functioning: recent advances in metaproteomics

    FEMS Microbiology Ecology

    Volume 80, Issue 2, May 2012, Pages: 265–280, Alma Siggins, Eoin Gunnigle and Florence Abram

    Version of Record online : 16 JAN 2012, DOI: 10.1111/j.1574-6941.2011.01284.x

  12. Metaproteomics to unravel major microbial players in leaf litter and soil environments: Challenges and perspectives

    PROTEOMICS

    Volume 13, Issue 18-19, October 2013, Pages: 2895–2909, Dörte Becher, Jörg Bernhardt, Stephan Fuchs and Katharina Riedel

    Version of Record online : 1 OCT 2013, DOI: 10.1002/pmic.201300095

  13. Protein-based stable isotope probing (protein-SIP) in functional metaproteomics

    Mass Spectrometry Reviews

    Volume 31, Issue 6, November/December 2012, Pages: 683–697, Jana Seifert, Martin Taubert, Nico Jehmlich, Frank Schmidt, Uwe Völker, Carsten Vogt, Hans-Hermann Richnow and Martin von Bergen

    Version of Record online : 15 MAR 2012, DOI: 10.1002/mas.21346

  14. You have full text access to this OnlineOpen article
    Needles in the blue sea: Sub-species specificity in targeted protein biomarker analyses within the vast oceanic microbial metaproteome

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3521–3531, Mak A. Saito, Alexander Dorsk, Anton F. Post, Matthew R. McIlvin, Michael S. Rappé, Giacomo R. DiTullio and Dawn M. Moran

    Version of Record online : 22 JUL 2015, DOI: 10.1002/pmic.201400630

  15. Environmental proteomics: Analysis of structure and function of microbial communities

    PROTEOMICS

    Volume 10, Issue 4, No. 4 February 2010, Pages: 785–798, Thomas Schneider and Kathrin Riedel

    Version of Record online : 1 DEC 2009, DOI: 10.1002/pmic.200900450

  16. Proteogenomics for environmental microbiology

    PROTEOMICS

    Volume 13, Issue 18-19, October 2013, Pages: 2731–2742, Jean Armengaud, Erica Marie Hartmann and Céline Bland

    Version of Record online : 18 JUN 2013, DOI: 10.1002/pmic.201200576

  17. Symbiosis, dysbiosis, and rebiosis—The value of metaproteomics in human microbiome monitoring

    PROTEOMICS

    Volume 15, Issue 5-6, March 2015, Pages: 1142–1151, Lei Mao and Jacqueline Franke

    Version of Record online : 28 DEC 2014, DOI: 10.1002/pmic.201400329

  18. Proteomics in environmental and technical microbiology

    Engineering in Life Sciences

    Volume 14, Issue 1, January 2014, Pages: 27–46, Dirk Benndorf and Udo Reichl

    Version of Record online : 22 NOV 2013, DOI: 10.1002/elsc.201200205

  19. Metaproteomics: Extracting and Mining Proteome Information to Characterize Metabolic Activities in Microbial Communities

    Unit

    Current Protocols in Bioinformatics

    13:13.26.1–13.26.14

    Paul E. Abraham, Richard J. Giannone, Weili Xiong and Robert L. Hettich

    Published Online : 17 JUN 2014, DOI: 10.1002/0471250953.bi1326s46

  20. Shotgun metaproteomic profiling of biomimetic anaerobic digestion processes treating sewage sludge

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3532–3543, Ariane Bize, Laëtitia Cardona, Elie Desmond-Le Quéméner, Audrey Battimelli, Nelly Badalato, Chrystelle Bureau, Céline Madigou, Didier Chevret, Alain Guillot, Véronique Monnet, Jean-Jacques Godon and Théodore Bouchez

    Version of Record online : 28 SEP 2015, DOI: 10.1002/pmic.201500041