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There are 4336 results for: content related to: Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities

  1. Metaproteomic analysis using the Galaxy framework

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3553–3565, Pratik D. Jagtap, Alan Blakely, Kevin Murray, Shaun Stewart, Joel Kooren, James E. Johnson, Nelson L. Rhodus, Joel Rudney and Timothy J. Griffin

    Version of Record online : 24 JUL 2015, DOI: 10.1002/pmic.201500074

  2. You have full text access to this OnlineOpen article
    A decade of metaproteomics: Where we stand and what the future holds

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3409–3417, Paul Wilmes, Anna Heintz-Buschart and Philip L. Bond

    Version of Record online : 10 SEP 2015, DOI: 10.1002/pmic.201500183

  3. Navigating through metaproteomics data: A logbook of database searching

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3439–3453, Thilo Muth, Carolin A. Kolmeder, Jarkko Salojärvi, Salla Keskitalo, Markku Varjosalo, Froukje J. Verdam, Sander S. Rensen, Udo Reichl, Willem M. de Vos, Erdmann Rapp and Lennart Martens

    Version of Record online : 27 APR 2015, DOI: 10.1002/pmic.201400560

  4. Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3424–3438, Weili Xiong, Paul E. Abraham, Zhou Li, Chongle Pan and Robert L. Hettich

    Version of Record online : 28 MAY 2015, DOI: 10.1002/pmic.201400571

  5. Enhancing metaproteomics—The value of models and defined environmental microbial systems

    PROTEOMICS

    Volume 16, Issue 5, March 2016, Pages: 783–798, Florian-Alexander Herbst, Vanessa Lünsmann, Henrik Kjeldal, Nico Jehmlich, Andreas Tholey, Martin von Bergen, Jeppe Lund Nielsen, Robert L. Hettich, Jana Seifert and Per Halkjær Nielsen

    Version of Record online : 21 JAN 2016, DOI: 10.1002/pmic.201500305

  6. Metaproteomics to unravel major microbial players in leaf litter and soil environments: Challenges and perspectives

    PROTEOMICS

    Volume 13, Issue 18-19, October 2013, Pages: 2895–2909, Dörte Becher, Jörg Bernhardt, Stephan Fuchs and Katharina Riedel

    Version of Record online : 1 OCT 2013, DOI: 10.1002/pmic.201300095

  7. Symbiosis, dysbiosis, and rebiosis—The value of metaproteomics in human microbiome monitoring

    PROTEOMICS

    Volume 15, Issue 5-6, March 2015, Pages: 1142–1151, Lei Mao and Jacqueline Franke

    Version of Record online : 28 DEC 2014, DOI: 10.1002/pmic.201400329

  8. Proteomics of the Roseobacter clade, a window to the marine microbiology landscape

    PROTEOMICS

    Volume 15, Issue 23-24, December 2015, Pages: 3928–3942, Joseph A. Christie-Oleza and Jean Armengaud

    Version of Record online : 23 NOV 2015, DOI: 10.1002/pmic.201500222

  9. Metaproteomics of aquatic microbial communities in a deep and stratified estuary

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3566–3579, David Colatriano, Arthi Ramachandran, Etienne Yergeau, Roxane Maranger, Yves Gélinas and David A. Walsh

    Version of Record online : 10 SEP 2015, DOI: 10.1002/pmic.201500079

  10. Quantitative proteomics in the field of microbiology

    PROTEOMICS

    Volume 14, Issue 4-5, March 2014, Pages: 547–565, Andreas Otto, Dörte Becher and Frank Schmidt

    Version of Record online : 4 MAR 2014, DOI: 10.1002/pmic.201300403

  11. Colonic metaproteomic signatures of active bacteria and the host in obesity

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3544–3552, Carolin A. Kolmeder, Jarmo Ritari, Froukje J. Verdam, Thilo Muth, Salla Keskitalo, Markku Varjosalo, Susana Fuentes, Jan Willem Greve, Wim A. Buurman, Udo Reichl, Erdmann Rapp, Lennart Martens, Airi Palva, Anne Salonen, Sander S. Rensen and Willem M. de Vos

    Version of Record online : 11 SEP 2015, DOI: 10.1002/pmic.201500049

  12. You have full text access to this OnlineOpen article
    Needles in the blue sea: Sub-species specificity in targeted protein biomarker analyses within the vast oceanic microbial metaproteome

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3521–3531, Mak A. Saito, Alexander Dorsk, Anton F. Post, Matthew R. McIlvin, Michael S. Rappé, Giacomo R. DiTullio and Dawn M. Moran

    Version of Record online : 22 JUL 2015, DOI: 10.1002/pmic.201400630

  13. Deep metaproteomic analysis of human salivary supernatant

    PROTEOMICS

    Volume 12, Issue 7, April 2012, Pages: 992–1001, Pratik Jagtap, Thomas McGowan, Sricharan Bandhakavi, Zheng Jin Tu, Sean Seymour, Timothy J. Griffin and Joel D. Rudney

    Version of Record online : 21 APR 2012, DOI: 10.1002/pmic.201100503

  14. Functional proteomics within the genus Lactobacillus

    PROTEOMICS

    Volume 16, Issue 6, March 2016, Pages: 946–962, Maria De Angelis, Maria Calasso, Noemi Cavallo, Raffaella Di Cagno and Marco Gobbetti

    Version of Record online : 17 MAR 2016, DOI: 10.1002/pmic.201500117

  15. Enrichment or depletion? The impact of stool pretreatment on metaproteomic characterization of the human gut microbiota

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3474–3485, Alessandro Tanca, Antonio Palomba, Salvatore Pisanu, Maria Filippa Addis and Sergio Uzzau

    Version of Record online : 19 MAR 2015, DOI: 10.1002/pmic.201400573

  16. You have free access to this content
    Improving the quality of genome, protein sequence, and taxonomy databases: A prerequisite for microbiome meta-omics 2.0

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3418–3423, Olivier Pible and Jean Armengaud

    Version of Record online : 10 SEP 2015, DOI: 10.1002/pmic.201500104

  17. Shotgun metaproteomic profiling of biomimetic anaerobic digestion processes treating sewage sludge

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3532–3543, Ariane Bize, Laëtitia Cardona, Elie Desmond-Le Quéméner, Audrey Battimelli, Nelly Badalato, Chrystelle Bureau, Céline Madigou, Didier Chevret, Alain Guillot, Véronique Monnet, Jean-Jacques Godon and Théodore Bouchez

    Version of Record online : 28 SEP 2015, DOI: 10.1002/pmic.201500041

  18. Metaproteomic evidence of changes in protein expression following a change in electrode potential in a robust biocathode microbiome

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3486–3496, Dagmar H. Leary, William Judson Hervey IV, Anthony P. Malanoski, Zheng Wang, Brian J. Eddie, Gabrielle S. Tender, Gary J. Vora, Leonard M. Tender, Baochuan Lin and Sarah M. Strycharz-Glaven

    Version of Record online : 8 SEP 2015, DOI: 10.1002/pmic.201400585

  19. Nutriproteomics: Facts, concepts, and perspectives

    PROTEOMICS

    Volume 15, Issue 5-6, March 2015, Pages: 997–1013, Sascha Sauer and Toni Luge

    Version of Record online : 6 FEB 2015, DOI: 10.1002/pmic.201400383

  20. You have full text access to this OnlineOpen article
    Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

    PROTEOMICS

    Volume 15, Issue 20, October 2015, Pages: 3508–3520, Rafael Bargiela, Florian-Alexander Herbst, Mónica Martínez-Martínez, Jana Seifert, David Rojo, Simone Cappello, María Genovese, Francesca Crisafi, Renata Denaro, Tatyana N. Chernikova, Coral Barbas, Martin von Bergen, Michail M. Yakimov, Manuel Ferrer and Peter N. Golyshin

    Version of Record online : 27 AUG 2015, DOI: 10.1002/pmic.201400614