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There are 20845 results for: content related to: Simultaneous prediction of protein secondary structure and transmembrane spans

  1. Computational modeling of membrane proteins

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 1, January 2015, Pages: 1–24, Julia Koehler Leman, Martin B. Ulmschneider and Jeffrey J. Gray

    Version of Record online : 19 NOV 2014, DOI: 10.1002/prot.24703

  2. Protein misfolding in the late-onset neurodegenerative diseases: Common themes and the unique case of amyotrophic lateral sclerosis

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 8, August 2013, Pages: 1285–1303, Vikram Khipple Mulligan and Avijit Chakrabartty

    Version of Record online : 2 JUL 2013, DOI: 10.1002/prot.24285

  3. Talin-driven inside-out activation mechanism of platelet αIIbβ3 integrin probed by multimicrosecond, all-atom molecular dynamics simulations

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 12, December 2014, Pages: 3231–3240, Davide Provasi, Ana Negri, Barry S. Coller and Marta Filizola

    Version of Record online : 25 SEP 2014, DOI: 10.1002/prot.24540

  4. AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 8, August 2015, Pages: 1385–1406, Gideon D. Lapidoth, Dror Baran, Gabriele M. Pszolla, Christoffer Norn, Assaf Alon, Michael D. Tyka and Sarel J. Fleishman

    Version of Record online : 6 JUN 2015, DOI: 10.1002/prot.24779

  5. Substrate versus inhibitor dynamics of P-glycoprotein

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 9, September 2013, Pages: 1653–1668, Jerome Ma and Philip C. Biggin

    Version of Record online : 17 JUN 2013, DOI: 10.1002/prot.24324

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    Refining the treatment of membrane proteins by coarse-grained models

    Proteins: Structure, Function, and Bioinformatics

    Volume 84, Issue 1, January 2016, Pages: 92–117, Igor Vorobyov, Ilsoo Kim, Zhen T. Chu and Arieh Warshel

    Version of Record online : 9 DEC 2015, DOI: 10.1002/prot.24958

  7. Structure and dynamics of DRD4 bound to an agonist and an antagonist using in silico approaches

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 5, May 2015, Pages: 867–880, Nidhi Jatana, Lipi Thukral and N. Latha

    Version of Record online : 26 MAR 2015, DOI: 10.1002/prot.24716

  8. You have full text access to this OnlineOpen article
    Motional timescale predictions by molecular dynamics simulations: Case study using proline and hydroxyproline sidechain dynamics

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 2, February 2014, Pages: 195–215, Abil E. Aliev, Martin Kulke, Harmeet S. Khaneja, Vijay Chudasama, Tom D. Sheppard and Rachel M. Lanigan

    Version of Record online : 17 SEP 2013, DOI: 10.1002/prot.24350

  9. Unbinding free energy of acetylcholinesterase bound oxime drugs along the gorge pathway from metadynamics-umbrella sampling investigation

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 1799–1818, Arup K. Pathak and Tusar Bandyopadhyay

    Version of Record online : 19 FEB 2014, DOI: 10.1002/prot.24533

  10. Application of information theory to a three-body coarse-grained representation of proteins in the PDB: Insights into the structural and evolutionary roles of residues in protein structure

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 12, December 2014, Pages: 3450–3465, Jared J. Thompson, Hamed Tabatabaei Ghomi and Markus A. Lill

    Version of Record online : 21 OCT 2014, DOI: 10.1002/prot.24698

  11. Dual effects of familial Alzheimer's disease mutations (D7H, D7N, and H6R) on amyloid β peptide: Correlation dynamics and zinc binding

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 12, December 2014, Pages: 3286–3297, Liang Xu, Yonggang Chen and Xiaojuan Wang

    Version of Record online : 21 OCT 2014, DOI: 10.1002/prot.24669

  12. You have full text access to this OnlineOpen article
    Ligand binding and dynamics of the monomeric epidermal growth factor receptor ectodomain

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 11, November 2013, Pages: 1931–1943, Hannes H. Loeffler and Martyn D. Winn

    Version of Record online : 18 AUG 2013, DOI: 10.1002/prot.24339

  13. Redesigning the stereospecificity of tyrosyl-tRNA synthetase

    Proteins: Structure, Function, and Bioinformatics

    Volume 84, Issue 2, February 2016, Pages: 240–253, Thomas Simonson, Shixin Ye-Lehmann, Zoltan Palmai, Najette Amara, Sandra Wydau-Dematteis, Erwan Bigan, Karen Druart, Clara Moch and Pierre Plateau

    Version of Record online : 7 JAN 2016, DOI: 10.1002/prot.24972

  14. Solution structure and properties of AlgH from Pseudomonas aeruginosa

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 6, June 2015, Pages: 1137–1150, Jeffrey L. Urbauer, Aaron B. Cowley, Hayley P. Broussard, Henry T. Niedermaier and Ramona J. Bieber Urbauer

    Version of Record online : 29 APR 2015, DOI: 10.1002/prot.24811

  15. An amino acid code for irregular and mixed protein packing

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 12, December 2015, Pages: 2147–2161, Hyun Joo, Archana G. Chavan, Keith J. Fraga and Jerry Tsai

    Version of Record online : 5 OCT 2015, DOI: 10.1002/prot.24929

  16. Computational modeling of the N-terminus of the human dopamine transporter and its interaction with PIP2-containing membranes

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 5, May 2015, Pages: 952–969, George Khelashvili, Milka Doktorova, Michelle A. Sahai, Niklaus Johner, Lei Shi and Harel Weinstein

    Version of Record online : 25 MAR 2015, DOI: 10.1002/prot.24792

  17. Hierarchical domain-motion analysis of conformational changes in sarcoplasmic reticulum Ca2+-ATPase

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 4, April 2015, Pages: 746–756, Chigusa Kobayashi, Ryotaro Koike, Motonori Ota and Yuji Sugita

    Version of Record online : 10 FEB 2015, DOI: 10.1002/prot.24763

  18. Mechanistic studies of the apical sodium-dependent bile acid transporter

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 6, June 2015, Pages: 1107–1117, Raphael Alhadeff, Assaf Ganoth and Isaiah T. Arkin

    Version of Record online : 28 APR 2015, DOI: 10.1002/prot.24796

  19. A detailed representation of electrostatic energy in prediction of sequence and pH dependence of protein stability

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 10, October 2014, Pages: 2497–2511, Michael J. Dudek

    Version of Record online : 9 JUN 2014, DOI: 10.1002/prot.24613

  20. Burial of nonpolar surface area and thermodynamic stabilization of globins as a function of chain elongation

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 10, October 2014, Pages: 2318–2331, Theodore S. Jennaro, Matthew R. Beaty, Neşe Kurt-Yilmaz, Benjamin L. Luskin and Silvia Cavagnero

    Version of Record online : 12 MAY 2014, DOI: 10.1002/prot.24590