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There are 17834 results for: content related to: Thermodynamic analysis of structural transitions during GNNQQNY aggregation

  1. Refining the treatment of membrane proteins by coarse-grained models

    Proteins: Structure, Function, and Bioinformatics

    Volume 84, Issue 1, January 2016, Pages: 92–117, Igor Vorobyov, Ilsoo Kim, Zhen T. Chu and Arieh Warshel

    Version of Record online : 9 DEC 2015, DOI: 10.1002/prot.24958

  2. Optimization of 3D Poisson–Nernst-Planck model for fast evaluation of diverse protein channels

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 10, October 2013, Pages: 1802–1822, Witold Dyrka, Maciej M. Bartuzel and Malgorzata Kotulska

    Version of Record online : 18 AUG 2013, DOI: 10.1002/prot.24326

  3. Protein misfolding in the late-onset neurodegenerative diseases: Common themes and the unique case of amyotrophic lateral sclerosis

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 8, August 2013, Pages: 1285–1303, Vikram Khipple Mulligan and Avijit Chakrabartty

    Version of Record online : 2 JUL 2013, DOI: 10.1002/prot.24285

  4. AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 8, August 2015, Pages: 1385–1406, Gideon D. Lapidoth, Dror Baran, Gabriele M. Pszolla, Christoffer Norn, Assaf Alon, Michael D. Tyka and Sarel J. Fleishman

    Version of Record online : 6 JUN 2015, DOI: 10.1002/prot.24779

  5. Unbinding free energy of acetylcholinesterase bound oxime drugs along the gorge pathway from metadynamics-umbrella sampling investigation

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 1799–1818, Arup K. Pathak and Tusar Bandyopadhyay

    Version of Record online : 19 FEB 2014, DOI: 10.1002/prot.24533

  6. Protein side-chain modeling with a protein-dependent optimized rotamer library

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 2000–2017, Patricia Francis-Lyon and Patrice Koehl

    Version of Record online : 16 APR 2014, DOI: 10.1002/prot.24555

  7. BetaVoid: Molecular voids via beta-complexes and Voronoi diagrams

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 1829–1849, Jae-Kwan Kim, Youngsong Cho, Roman A Laskowski, Seong Eon Ryu, Kokichi Sugihara and Deok-Soo Kim

    Version of Record online : 20 MAR 2014, DOI: 10.1002/prot.24537

  8. You have full text access to this OnlineOpen article
    Ligand binding and dynamics of the monomeric epidermal growth factor receptor ectodomain

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 11, November 2013, Pages: 1931–1943, Hannes H. Loeffler and Martyn D. Winn

    Version of Record online : 18 AUG 2013, DOI: 10.1002/prot.24339

  9. Adaptive Smith–Waterman residue match seeding for protein structural alignment

    Proteins: Structure, Function, and Bioinformatics

    Volume 81, Issue 10, October 2013, Pages: 1823–1839, Christopher M. Topham, Mickaël Rouquier, Nathalie Tarrat and Isabelle André

    Version of Record online : 18 AUG 2013, DOI: 10.1002/prot.24327

  10. Dynamics and thermodynamic properties of CXCL7 chemokine

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 11, November 2015, Pages: 1987–2007, Charles A. Herring, Christopher M. Singer, Elena A. Ermakova, Bulat I. Khairutdinov, Yuriy F. Zuev, Donald J. Jacobs and Irina V. Nesmelova

    Version of Record online : 2 SEP 2015, DOI: 10.1002/prot.24913

  11. Coupling between overall rotational diffusion and domain motions in proteins and its effect on dielectric spectra

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 9, September 2015, Pages: 1571–1581, Yaroslav Ryabov

    Version of Record online : 6 AUG 2015, DOI: 10.1002/prot.24814

  12. Method for identification of rigid domains and hinge residues in proteins based on exhaustive enumeration

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 6, June 2015, Pages: 1054–1067, Jaehyun Sim, Jun Sim, Eunsung Park and Julian Lee

    Version of Record online : 22 APR 2015, DOI: 10.1002/prot.24799

  13. Validating computer simulations of enantioselective catalysis; reproducing the large steric and entropic contributions in Candida Antarctica lipase B

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 7, July 2014, Pages: 1387–1399, Patrick Schopf and Arieh Warshel

    Version of Record online : 25 JAN 2014, DOI: 10.1002/prot.24506

  14. Kinetics of protein fibrillation controlled by fibril elongation

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 2229–2239, Dimo Kashchiev

    Version of Record online : 2 MAY 2014, DOI: 10.1002/prot.24586

  15. Thermodynamics of Aβ16–21 dissociation from a fibril: Enthalpy, entropy, and volumetric properties

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 11, November 2015, Pages: 1963–1972, Srinivasa Rao Jampani, Farbod Mahmoudinobar, Zhaoqian Su and Cristiano L. Dias

    Version of Record online : 5 OCT 2015, DOI: 10.1002/prot.24875

  16. Computational modeling of membrane proteins

    Proteins: Structure, Function, and Bioinformatics

    Volume 83, Issue 1, January 2015, Pages: 1–24, Julia Koehler Leman, Martin B. Ulmschneider and Jeffrey J. Gray

    Version of Record online : 19 NOV 2014, DOI: 10.1002/prot.24703

  17. Discerning intersecting fusion-activation pathways in the Nipah virus using machine learning

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 12, December 2014, Pages: 3241–3254, Sameer Varma, Mohsen Botlani and Ralph E. Leighty

    Version of Record online : 9 OCT 2014, DOI: 10.1002/prot.24541

  18. Exploring the multiscale signaling behavior of phototropin1 from Chlamydomonas reinhardtii using a full-residue space kinetic Monte Carlo molecular dynamics technique

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 9, September 2014, Pages: 2018–2040, Emanuel Peter, Bernhard Dick, Ivan Stambolic and Stephan A. Baeurle

    Version of Record online : 16 APR 2014, DOI: 10.1002/prot.24556

  19. An effective Coarse-grained model for biological simulations: Recent refinements and validations

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 7, July 2014, Pages: 1168–1185, Spyridon Vicatos, Anna Rychkova, Shayantani Mukherjee and Arieh Warshel

    Version of Record online : 6 DEC 2013, DOI: 10.1002/prot.24482

  20. You have full text access to this OnlineOpen article
    Motional timescale predictions by molecular dynamics simulations: Case study using proline and hydroxyproline sidechain dynamics

    Proteins: Structure, Function, and Bioinformatics

    Volume 82, Issue 2, February 2014, Pages: 195–215, Abil E. Aliev, Martin Kulke, Harmeet S. Khaneja, Vijay Chudasama, Tom D. Sheppard and Rachel M. Lanigan

    Version of Record online : 17 SEP 2013, DOI: 10.1002/prot.24350