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There are 22992 results for: content related to: Funnels, pathways, and the energy landscape of protein folding: A synthesis

  1. Protein folding in the landscape perspective: Chevron plots and non-arrhenius kinetics

    Proteins: Structure, Function, and Bioinformatics

    Volume 30, Issue 1, 1 January 1998, Pages: 2–33, Hue Sun Chan and Ken A. Dill

    Version of Record online : 7 DEC 1998, DOI: 10.1002/(SICI)1097-0134(19980101)30:1<2::AID-PROT2>3.0.CO;2-R

  2. You have free access to this content
    Polymer principles and protein folding

    Protein Science

    Volume 8, Issue 6, 1999, Pages: 1166–1180, Ken A. Dill

    Version of Record online : 31 DEC 2008, DOI: 10.1110/ps.8.6.1166

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    The topomer search model: A simple, quantitative theory of two-state protein folding kinetics

    Protein Science

    Volume 12, Issue 1, January 2003, Pages: 17–26, Dmitrii E. Makarov and Kevin W. Plaxco

    Version of Record online : 1 JAN 2009, DOI: 10.1110/ps.0220003

  4. Learning To Fold Proteins Using Energy Landscape Theory

    Israel Journal of Chemistry

    Volume 54, Issue 8-9, August 2014, Pages: 1311–1337, Nicholas P. Schafer, Bobby L. Kim, Weihua Zheng and Peter G. Wolynes

    Version of Record online : 20 AUG 2014, DOI: 10.1002/ijch.201300145

  5. Towards understanding the mechanisms of molecular recognition by computer simulations of ligand–protein interactions

    Journal of Molecular Recognition

    Volume 12, Issue 6, November/December 1999, Pages: 371–389, Gennady M. Verkhivker, Paul A. Rejto, Djamal Bouzida, Sandra Arthurs, Anthony B. Colson, Stephan T. Freer, Daniel K. Gehlhaar, Veda Larson, Brock A. Luty, Tami Marrone and Peter W. Rose

    Version of Record online : 24 DEC 1999, DOI: 10.1002/(SICI)1099-1352(199911/12)12:6<371::AID-JMR479>3.0.CO;2-O

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    Principles of protein folding — A perspective from simple exact models

    Protein Science

    Volume 4, Issue 4, April 1995, Pages: 561–602, Ken A. Dill, Sarina Bromberg, Kaizhi Yue, Hue Sun Chan, Klaus M. Ftebig, David P. Yee and Paul D. Thomas

    Version of Record online : 31 DEC 2008, DOI: 10.1002/pro.5560040401

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    Folding funnels, binding funnels, and protein function

    Protein Science

    Volume 8, Issue 6, 1999, Pages: 1181–1190, Chung-Jung Tsai, Sandeep Kumar, Buyong Ma and Ruth Nussinov

    Version of Record online : 31 DEC 2008, DOI: 10.1110/ps.8.6.1181

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    Water and molecular chaperones act as weak links of protein folding networks: Energy landscape and punctuated equilibrium changes point towards a game theory of proteins

    FEBS Letters

    Volume 579, Issue 11, April 25, 2005, Pages: 2254–2260, István A. Kovács, Máté S. Szalay and Peter Csermely

    Version of Record online : 2 APR 2005, DOI: 10.1016/j.febslet.2005.03.056

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    Protein folding in the post-genomic era

    Journal of Cellular and Molecular Medicine

    Volume 6, Issue 3, July 2002, Pages: 307–327, Jeannine M. Yon

    Version of Record online : 1 MAY 2007, DOI: 10.1111/j.1582-4934.2002.tb00511.x

  10. Calculation of free energy landscapes: A histogram reweighted metadynamics approach

    Journal of Computational Chemistry

    Volume 32, Issue 10, 30 July 2011, Pages: 2084–2096, Jens Smiatek and Andreas Heuer

    Version of Record online : 15 APR 2011, DOI: 10.1002/jcc.21790

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    Entropic barriers, transition states, funnels, and exponential protein folding kinetics: A simple model

    Protein Science

    Volume 9, Issue 3, 2000, Pages: 452–465, D. J. Bicout and Attila Szabo

    Version of Record online : 31 DEC 2008, DOI: 10.1110/ps.9.3.452

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    Energy landscape and dynamics of the β-hairpin G peptide and its isomers: Topology and sequences

    Protein Science

    Volume 12, Issue 9, September 2003, Pages: 1882–1893, Buyong Ma and Ruth Nussinov

    Version of Record online : 1 JAN 2009, DOI: 10.1110/ps.0306103

  13. Protein folding mechanisms and the multidimensional folding funnel

    Proteins: Structure, Function, and Bioinformatics

    Volume 32, Issue 2, 1 August 1998, Pages: 136–158, Nicholas D. Socci, José Nelson Onuchic and Peter G. Wolynes

    Version of Record online : 7 DEC 1998, DOI: 10.1002/(SICI)1097-0134(19980801)32:2<136::AID-PROT2>3.0.CO;2-J

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    Folding and binding cascades: Dynamic landscapes and population shifts

    Protein Science

    Volume 9, Issue 1, 2000, Pages: 10–19, Sandeep Kumar, Buyong Ma, Chung-Jung Tsai, Neeti Sinha and Ruth Nussinov

    Version of Record online : 31 DEC 2008, DOI: 10.1110/ps.9.1.10

  15. Energy Landscapes: From Clusters to Biomolecules

    Advances in Chemical Physics, Volume 115

    David J. Wales, Jonathan P. K. Doye, Mark A. Miller, Paul N. Mortenson, Tiffany R. Walsh, Pages: 1–111, 2007

    Published Online : 14 MAR 2007, DOI: 10.1002/9780470141748.ch1

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    Redesigning the hydrophobic core of a model β-sheet protein: Destabilizing traps through a threading approach

    Proteins: Structure, Function, and Bioinformatics

    Volume 37, Issue 4, 1 December 1999, Pages: 582–591, Jon M. Sorenson and Teresa Head-Gordon

    Version of Record online : 25 JAN 2000, DOI: 10.1002/(SICI)1097-0134(19991201)37:4<582::AID-PROT9>3.0.CO;2-M

  17. Coarse-Grained and Atomistic MD Simulations of RNA and DNA Folding

    Israel Journal of Chemistry

    Volume 54, Issue 8-9, August 2014, Pages: 1152–1164, Jessica D. Leuchter, Adam T. Green, Julian Gilyard, Cecilia G. Rambarat and Samuel S. Cho

    Version of Record online : 13 MAY 2014, DOI: 10.1002/ijch.201400022

  18. Energy Landscape Analysis of Protein Dimers

    Israel Journal of Chemistry

    Volume 44, Issue 1-3, October 2004, Pages: 281–297, Yaakov Levy, Garegin A. Papoian, José N. Onuchic and Peter G. Wolynes

    Version of Record online : 8 MAR 2010, DOI: 10.1560/XGCB-WUHN-JRJC-BV0Y

  19. Force-clamp Spectroscopy of Single Proteins

    Single Molecule Dynamics in Life Science

    Lorna Dougan, Jasna Brujic, Julio M. Fernandez, Pages: 297–321, 2009

    Published Online : 25 FEB 2009, DOI: 10.1002/9783527626137.ch13

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    The effects of nonnative interactions on protein folding rates: Theory and simulation

    Protein Science

    Volume 13, Issue 7, July 2004, Pages: 1750–1766, Cecilia Clementi and Steven S. Plotkin

    Version of Record online : 1 JAN 2009, DOI: 10.1110/ps.03580104