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There are 15900 results for: content related to: De novo transcriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set

  1. A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1192–1204, Isabelle Lesur, Alison Bechade, Céline Lalanne, Christophe Klopp, Céline Noirot, Jean-Charles Leplé, Antoine Kremer, Christophe Plomion and Grégoire Le Provost

    Article first published online : 30 JAN 2015, DOI: 10.1111/1755-0998.12373

  2. The red coral (Corallium rubrum) transcriptome: a new resource for population genetics and local adaptation studies

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1205–1215, M. Pratlong, A. Haguenauer, O. Chabrol, C. Klopp, P. Pontarotti and D. Aurelle

    Article first published online : 22 FEB 2015, DOI: 10.1111/1755-0998.12383

  3. Development of genomic resources for Nothofagus species using next-generation sequencing data

    Molecular Ecology Resources

    Volume 14, Issue 6, November 2014, Pages: 1281–1295, V. A. El Mujtar, L. A. Gallo, T. Lang and P. Garnier-Géré

    Article first published online : 9 JUN 2014, DOI: 10.1111/1755-0998.12276

  4. A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing, characterization and overview of the gene expression along three life cycle stages

    Molecular Ecology Resources

    Volume 13, Issue 3, May 2013, Pages: 494–509, A. R. Pérez-Porro, D. Navarro-Gómez, M. J. Uriz and G. Giribet

    Article first published online : 26 FEB 2013, DOI: 10.1111/1755-0998.12085

  5. Transcriptome resources for the white-footed mouse (Peromyscus leucopus): new genomic tools for investigating ecologically divergent urban and rural populations

    Molecular Ecology Resources

    Volume 15, Issue 2, March 2015, Pages: 382–394, Stephen E. Harris, Rachel J. O'Neill and Jason Munshi-South

    Article first published online : 16 JUL 2014, DOI: 10.1111/1755-0998.12301

  6. Genomic exploration and molecular marker development in a large and complex conifer genome using RADseq and mRNAseq

    Molecular Ecology Resources

    Volume 15, Issue 3, May 2015, Pages: 601–612, M.-J. Karam, F. Lefèvre, M. Bou Dagher-Kharrat, S. Pinosio and G.G. Vendramin

    Article first published online : 3 OCT 2014, DOI: 10.1111/1755-0998.12329

  7. You have full text access to this OnlineOpen article
    Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera

    Molecular Ecology Resources

    Volume 15, Issue 3, May 2015, Pages: 489–501, Brant C. Faircloth, Michael G. Branstetter, Noor D. White and Seán G. Brady

    Article first published online : 29 SEP 2014, DOI: 10.1111/1755-0998.12328

  8. The plover neurotranscriptome assembly: transcriptomic analysis in an ecological model species without a reference genome

    Molecular Ecology Resources

    Volume 13, Issue 4, July 2013, Pages: 696–705, Hooman K. Moghadam, Peter W. Harrison, Gergely Zachar, Tamás Székely and Judith E. Mank

    Article first published online : 29 MAR 2013, DOI: 10.1111/1755-0998.12096

  9. Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum)

    Molecular Ecology Resources

    Volume 13, Issue 2, March 2013, Pages: 289–294, Peter R. Wilton, Daniel B. Sloan, John M. Logsdon Jr, Harshavardhan Doddapaneni and Maurine Neiman

    Article first published online : 27 DEC 2012, DOI: 10.1111/1755-0998.12051

  10. SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates

    Molecular Ecology Resources

    Volume 15, Issue 4, July 2015, Pages: 723–736, Anders Gonçalves da Silva, William Barendse, James W. Kijas, Wes C. Barris, Sean McWilliam, Rowan J. Bunch, Russell McCullough, Blair Harrison, A. Rus Hoelzel and Phillip R. England

    Article first published online : 23 NOV 2014, DOI: 10.1111/1755-0998.12343

  11. De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome

    Molecular Ecology Resources

    Volume 15, Issue 1, January 2015, Pages: 203–215, Péter Szövényi, Pierre-François Perroud, Aikaterini Symeonidi, Sean Stevenson, Ralph S. Quatrano, Stefan A. Rensing, Andrew C. Cuming and Stuart F. McDaniel

    Article first published online : 13 JUN 2014, DOI: 10.1111/1755-0998.12284

  12. Development of an Arabis alpina genomic contig sequence data set and application to single nucleotide polymorphisms discovery

    Molecular Ecology Resources

    Volume 14, Issue 2, March 2014, Pages: 411–418, Stéphane Lobréaux, Stephanie Manel and Christelle Melodelima

    Article first published online : 16 NOV 2013, DOI: 10.1111/1755-0998.12189

  13. Potential and pitfalls of eukaryotic metagenome skimming: a test case for lichens

    Molecular Ecology Resources

    Volume 16, Issue 2, March 2016, Pages: 511–523, Bastian Greshake, Simonida Zehr, Francesco Dal Grande, Anjuli Meiser, Imke Schmitt and Ingo Ebersberger

    Article first published online : 26 SEP 2015, DOI: 10.1111/1755-0998.12463

  14. Exon capture phylogenomics: efficacy across scales of divergence

    Molecular Ecology Resources

    Jason G. Bragg, Sally Potter, Ke Bi and Craig Moritz

    Article first published online : 20 AUG 2015, DOI: 10.1111/1755-0998.12449

  15. First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species, Pinus halepensis Mill

    Molecular Ecology Resources

    Volume 14, Issue 4, July 2014, Pages: 846–856, S. Pinosio, S. C. González-Martínez, F. Bagnoli, F. Cattonaro, D. Grivet, F. Marroni, Z. Lorenzo, J. G. Pausas, M. Verdú and G. G. Vendramin

    Article first published online : 4 MAR 2014, DOI: 10.1111/1755-0998.12232

  16. Genomic resource development for shellfish of conservation concern

    Molecular Ecology Resources

    Volume 13, Issue 2, March 2013, Pages: 295–305, Emma B. Timmins-Schiffman, Carolyn S. Friedman, Dave C. Metzger, Samuel J. White and Steven B. Roberts

    Article first published online : 27 DEC 2012, DOI: 10.1111/1755-0998.12052

  17. Transcriptome sequencing and microarray development for the woodrat (Neotoma spp.): custom genetic tools for exploring herbivore ecology

    Molecular Ecology Resources

    Volume 13, Issue 4, July 2013, Pages: 674–687, J. R. Malenke, B. Milash, A. W. Miller and M. D. Dearing

    Article first published online : 16 MAR 2013, DOI: 10.1111/1755-0998.12092

  18. Mass production of SNP markers in a nonmodel passerine bird through RAD sequencing and contig mapping to the zebra finch genome

    Molecular Ecology Resources

    Volume 13, Issue 5, September 2013, Pages: 899–907, Yann X. C. Bourgeois, Emeline Lhuillier, Timothée Cézard, Joris A. M. Bertrand, Boris Delahaie, Josselin Cornuault, Thomas Duval, Olivier Bouchez, Borja Milá and Christophe Thébaud

    Article first published online : 16 JUL 2013, DOI: 10.1111/1755-0998.12137

  19. You have full text access to this OnlineOpen article
    Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1145–1152, Lilian Pukk, Freed Ahmad, Shihab Hasan, Veljo Kisand, Riho Gross and Anti Vasemägi

    Article first published online : 10 MAR 2015, DOI: 10.1111/1755-0998.12392

  20. You have full text access to this OnlineOpen article
    Pyrosequencing and de novo assembly of Antarctic krill (Euphausia superba) transcriptome to study the adaptability of krill to climate-induced environmental changes

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1460–1471, B. Meyer, P. Martini, A. Biscontin, C. De Pittà, C. Romualdi, M. Teschke, S. Frickenhaus, L. Harms, U. Freier, S. Jarman and S. Kawaguchi

    Article first published online : 9 APR 2015, DOI: 10.1111/1755-0998.12408