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There are 37487 results for: content related to: Quantifying sequence proportions in a DNA -based diet study using Ion Torrent amplicon sequencing: which counts count?

  1. Evaluating noninvasive genetic sampling techniques to estimate large carnivore abundance

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1133–1144, Matthew A. Mumma, Chris Zieminski, Todd K. Fuller, Shane P. Mahoney and Lisette P. Waits

    Version of Record online : 4 MAR 2015, DOI: 10.1111/1755-0998.12390

  2. Assessing the utility of whole genome amplified DNA for next-generation molecular ecology

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1079–1090, Christopher Blair, C. Ryan Campbell and Anne D. Yoder

    Version of Record online : 8 FEB 2015, DOI: 10.1111/1755-0998.12376

  3. Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias

    Molecular Ecology

    Volume 23, Issue 15, August 2014, Pages: 3706–3718, Austen C. Thomas, Simon N. Jarman, Katherine H. Haman, Andrew W. Trites and Bruce E. Deagle

    Version of Record online : 24 OCT 2013, DOI: 10.1111/mec.12523

  4. Ultra-deep Illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata)

    Molecular Ecology Resources

    Volume 14, Issue 4, July 2014, Pages: 753–767, Jackie Lighten, Cock van Oosterhout, Ian G. Paterson, Mark McMullan and Paul Bentzen

    Version of Record online : 5 FEB 2014, DOI: 10.1111/1755-0998.12225

  5. DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

    Molecular Ecology Resources

    Volume 14, Issue 2, March 2014, Pages: 306–323, M. De Barba, C. Miquel, F. Boyer, C. Mercier, D. Rioux, E. Coissac and P. Taberlet

    Version of Record online : 16 NOV 2013, DOI: 10.1111/1755-0998.12188

  6. Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq)

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1304–1315, Carly F. Graham, Travis C. Glenn, Andrew G. McArthur, Douglas R. Boreham, Troy Kieran, Stacey Lance, Richard G. Manzon, Jessica A. Martino, Todd Pierson, Sean M. Rogers, Joanna Y. Wilson and Christopher M. Somers

    Version of Record online : 1 APR 2015, DOI: 10.1111/1755-0998.12404

  7. Balancing sample accumulation and DNA degradation rates to optimize noninvasive genetic sampling of sympatric carnivores

    Molecular Ecology Resources

    Volume 15, Issue 4, July 2015, Pages: 831–842, Robert C. Lonsinger, Eric M. Gese, Steven J. Dempsey, Bryan M. Kluever, Timothy R. Johnson and Lisette P. Waits

    Version of Record online : 16 DEC 2014, DOI: 10.1111/1755-0998.12356

  8. The Quantification of Representative Sequences pipeline for amplicon sequencing: case study on within-population ITS1 sequence variation in a microparasite infecting Daphnia

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1385–1395, E. González-Tortuero, J. Rusek, A. Petrusek, S. Gießler, D. Lyras, S. Grath, F. Castro-Monzón and J. Wolinska

    Version of Record online : 5 MAR 2015, DOI: 10.1111/1755-0998.12396

  9. Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material

    Molecular Ecology Resources

    Volume 16, Issue 3, May 2016, Pages: 714–726, Austen C. Thomas, Bruce E. Deagle, J. Paige Eveson, Corie H. Harsch and Andrew W. Trites

    Version of Record online : 18 DEC 2015, DOI: 10.1111/1755-0998.12490

  10. Universal and blocking primer mismatches limit the use of high-throughput DNA sequencing for the quantitative metabarcoding of arthropods

    Molecular Ecology Resources

    Volume 15, Issue 4, July 2015, Pages: 819–830, J. Piñol, G. Mir, P. Gomez-Polo and N. Agustí

    Version of Record online : 23 DEC 2014, DOI: 10.1111/1755-0998.12355

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    amplisas: a web server for multilocus genotyping using next-generation amplicon sequencing data

    Molecular Ecology Resources

    Volume 16, Issue 2, March 2016, Pages: 498–510, Alvaro Sebastian, Magdalena Herdegen, Magdalena Migalska and Jacek Radwan

    Version of Record online : 26 AUG 2015, DOI: 10.1111/1755-0998.12453

  12. Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1316–1329, Hans Recknagel, Arne Jacobs, Pawel Herzyk and Kathryn R. Elmer

    Version of Record online : 6 APR 2015, DOI: 10.1111/1755-0998.12406

  13. Evolutionary factors affecting the cross-species utility of newly developed microsatellite markers in seabirds

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1046–1058, Yoshan Moodley, Juan F. Masello, Theresa L. Cole, Luciano Calderon, Gopi K. Munimanda, Marco R. Thali, Rachael Alderman, Richard J. Cuthbert, Manuel Marin, Melanie Massaro, Joan Navarro, Richard A. Phillips, Peter G. Ryan, Cristián G. Suazo, Yves Cherel, Henri Weimerskirch and Petra Quillfeldt

    Version of Record online : 29 JAN 2015, DOI: 10.1111/1755-0998.12372

  14. SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates

    Molecular Ecology Resources

    Volume 15, Issue 4, July 2015, Pages: 723–736, Anders Gonçalves da Silva, William Barendse, James W. Kijas, Wes C. Barris, Sean McWilliam, Rowan J. Bunch, Russell McCullough, Blair Harrison, A. Rus Hoelzel and Phillip R. England

    Version of Record online : 23 NOV 2014, DOI: 10.1111/1755-0998.12343

  15. Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference

    Molecular Ecology Resources

    Volume 15, Issue 1, January 2015, Pages: 28–41, A. Mastretta-Yanes, N. Arrigo, N. Alvarez, T. H. Jorgensen, D. Piñero and B. C. Emerson

    Version of Record online : 3 JUL 2014, DOI: 10.1111/1755-0998.12291

  16. A single-nucleotide polymorphism-based approach for rapid and cost-effective genetic wolf monitoring in Europe based on noninvasively collected samples

    Molecular Ecology Resources

    Volume 15, Issue 2, March 2015, Pages: 295–305, Robert H. S. Kraus, Bridgett vonHoldt, Berardino Cocchiararo, Verena Harms, Helmut Bayerl, Ralph Kühn, Daniel W. Förster, Jörns Fickel, Christian Roos and Carsten Nowak

    Version of Record online : 8 AUG 2014, DOI: 10.1111/1755-0998.12307

  17. Towards a universal barcode of oomycetes – a comparison of the cox1 and cox2 loci

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1275–1288, Young-Joon Choi, Gordon Beakes, Sally Glockling, Julia Kruse, Bora Nam, Lisa Nigrelli, Sebastian Ploch, Hyeon-Dong Shin, Roger G. Shivas, Sabine Telle, Hermann Voglmayr and Marco Thines

    Version of Record online : 24 MAR 2015, DOI: 10.1111/1755-0998.12398

  18. Reliable genotyping of the koala (Phascolarctos cinereus) using DNA isolated from a single faecal pellet

    Molecular Ecology Resources

    Volume 13, Issue 4, July 2013, Pages: 634–641, Faye Wedrowicz, Mawar Karsa, Jennifer Mosse and Fiona E. Hogan

    Version of Record online : 15 APR 2013, DOI: 10.1111/1755-0998.12101

  19. Noninvasive individual and species identification of jaguars (Panthera onca), pumas (Puma concolor) and ocelots (Leopardus pardalis) in Belize, Central America using cross-species microsatellites and faecal DNA

    Molecular Ecology Resources

    Volume 14, Issue 6, November 2014, Pages: 1171–1182, Claudia Wultsch, Lisette P. Waits and Marcella J. Kelly

    Version of Record online : 14 MAY 2014, DOI: 10.1111/1755-0998.12266

  20. Characterizing genic and nongenic molecular markers: comparison of microsatellites and SNPs

    Molecular Ecology Resources

    Volume 13, Issue 3, May 2013, Pages: 377–392, Jacquelin DeFaveri, Heidi Viitaniemi, Erica Leder and Juha Merilä

    Version of Record online : 29 JAN 2013, DOI: 10.1111/1755-0998.12071