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There are 1603 results for: content related to: SOAP B arcode: revealing arthropod biodiversity through assembly of Illumina shotgun sequences of PCR amplicons

  1. Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil the mesofauna of the soil

    Methods in Ecology and Evolution

    Paula Arribas, Carmelo Andújar, Kevin Hopkins, Matthew Shepherd and Alfried P. Vogler

    Version of Record online : 7 APR 2016, DOI: 10.1111/2041-210X.12557

  2. You have full text access to this OnlineOpen article
    High-throughput monitoring of wild bee diversity and abundance via mitogenomics

    Methods in Ecology and Evolution

    Volume 6, Issue 9, September 2015, Pages: 1034–1043, Min Tang, Chloe J. Hardman, Yinqiu Ji, Guanliang Meng, Shanlin Liu, Meihua Tan, Shenzhou Yang, Ellen D. Moss, Jiaxin Wang, Chenxue Yang, Catharine Bruce, Tim Nevard, Simon G. Potts, Xin Zhou and Douglas W. Yu

    Version of Record online : 6 JUL 2015, DOI: 10.1111/2041-210X.12416

  3. You have full text access to this OnlineOpen article
    The ecologist's field guide to sequence-based identification of biodiversity

    Methods in Ecology and Evolution

    Simon Creer, Kristy Deiner, Serita Frey, Dorota Porazinska, Pierre Taberlet, W. Kelley Thomas, Caitlin Potter and Holly M. Bik

    Version of Record online : 14 MAY 2016, DOI: 10.1111/2041-210X.12574

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    Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data

    Methods in Ecology and Evolution

    Volume 5, Issue 10, October 2014, Pages: 1086–1094, Cuong Q. Tang, Aelys M. Humphreys, Diego Fontaneto and Timothy G. Barraclough

    Version of Record online : 29 OCT 2014, DOI: 10.1111/2041-210X.12246

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    PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

    Methods in Ecology and Evolution

    Volume 6, Issue 8, August 2015, Pages: 973–980, Hyun S. Gweon, Anna Oliver, Joanne Taylor, Tim Booth, Melanie Gibbs, Daniel S. Read, Robert I. Griffiths and Karsten Schonrogge

    Version of Record online : 25 MAY 2015, DOI: 10.1111/2041-210X.12399

  6. Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf-feeding monkey (Pygathrix nemaeus)

    Molecular Ecology Resources

    Volume 15, Issue 2, March 2015, Pages: 250–261, Amrita Srivathsan, John C. M. Sha, Alfried P. Vogler and Rudolf Meier

    Version of Record online : 1 AUG 2014, DOI: 10.1111/1755-0998.12302

  7. Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages

    Methods in Ecology and Evolution

    Volume 6, Issue 8, August 2015, Pages: 883–894, Carola Gómez-Rodríguez, Alex Crampton-Platt, Martijn J. T. N. Timmermans, Andrés Baselga and Alfried P. Vogler

    Version of Record online : 27 APR 2015, DOI: 10.1111/2041-210X.12376

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    Using phylogenetic information and the comparative method to evaluate hypotheses in macroecology

    Methods in Ecology and Evolution

    Volume 4, Issue 5, May 2013, Pages: 401–415, Cristián E. Hernández, Enrique Rodríguez-Serrano, Jorge Avaria-Llautureo, Oscar Inostroza-Michael, Bryan Morales-Pallero, Dusan Boric-Bargetto, Cristian B. Canales-Aguirre, Pablo A. Marquet and Andrew Meade

    Version of Record online : 19 FEB 2013, DOI: 10.1111/2041-210X.12033

  9. Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

    Molecular Ecology

    Volume 25, Issue 4, February 2016, Pages: 929–942, Alice Valentini, Pierre Taberlet, Claude Miaud, Raphaël Civade, Jelger Herder, Philip Francis Thomsen, Eva Bellemain, Aurélien Besnard, Eric Coissac, Frédéric Boyer, Coline Gaboriaud, Pauline Jean, Nicolas Poulet, Nicolas Roset, Gordon H. Copp, Philippe Geniez, Didier Pont, Christine Argillier, Jean-Marc Baudoin, Tiphaine Peroux, Alain J. Crivelli, Anthony Olivier, Manon Acqueberge, Matthieu Le Brun, Peter R. Møller, Eske Willerslev and Tony Dejean

    Version of Record online : 18 JAN 2016, DOI: 10.1111/mec.13428

  10. Towards next-generation biodiversity assessment using DNA metabarcoding

    Molecular Ecology

    Volume 21, Issue 8, April 2012, Pages: 2045–2050, PIERRE TABERLET, ERIC COISSAC, FRANÇOIS POMPANON, CHRISTIAN BROCHMANN and ESKE WILLERSLEV

    Version of Record online : 10 APR 2012, DOI: 10.1111/j.1365-294X.2012.05470.x

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    Bioinformatic challenges for DNA metabarcoding of plants and animals

    Molecular Ecology

    Volume 21, Issue 8, April 2012, Pages: 1834–1847, ERIC COISSAC, TIAYYBA RIAZ and NICOLAS PUILLANDRE

    Version of Record online : 10 APR 2012, DOI: 10.1111/j.1365-294X.2012.05550.x

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    18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species

    Ecology and Evolution

    Volume 6, Issue 6, March 2016, Pages: 1809–1824, Aitor Albaina, Mikel Aguirre, David Abad, María Santos and Andone Estonba

    Version of Record online : 19 FEB 2016, DOI: 10.1002/ece3.1986

  13. Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

    Molecular Ecology Resources

    Volume 15, Issue 3, May 2015, Pages: 543–556, Gentile F. Ficetola, Johan Pansu, Aurélie Bonin, Eric Coissac, Charline Giguet-Covex, Marta De Barba, Ludovic Gielly, Carla M. Lopes, Frédéric Boyer, François Pompanon, Gilles Rayé and Pierre Taberlet

    Version of Record online : 10 NOV 2014, DOI: 10.1111/1755-0998.12338

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    Towards the identification of the loci of adaptive evolution

    Methods in Ecology and Evolution

    Volume 6, Issue 4, April 2015, Pages: 445–464, Carolina Pardo-Diaz, Camilo Salazar and Chris D. Jiggins

    Version of Record online : 12 FEB 2015, DOI: 10.1111/2041-210X.12324

  15. Understanding movements of organisms: it's time to abandon the Lévy foraging hypothesis

    Methods in Ecology and Evolution

    Volume 6, Issue 1, January 2015, Pages: 1–16, Graham H. Pyke

    Version of Record online : 25 NOV 2014, DOI: 10.1111/2041-210X.12298

  16. New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems

    Molecular Ecology

    Volume 21, Issue 8, April 2012, Pages: 1821–1833, LAURA S. EPP, SANNE BOESSENKOOL, EVA P. BELLEMAIN, JAMES HAILE, ALFONSO ESPOSITO, TIAYYBA RIAZ, CHRISTER ERSÉUS, VLADIMIR I. GUSAROV, MARY E. EDWARDS, ARILD JOHNSEN, HANS K. STENØIEN, KRISTIAN HASSEL, HÅVARD KAUSERUD, NIGEL G. YOCCOZ, KARI ANNE BRÅTHEN, ESKE WILLERSLEV, PIERRE TABERLET, ERIC COISSAC and CHRISTIAN BROCHMANN

    Version of Record online : 10 APR 2012, DOI: 10.1111/j.1365-294X.2012.05537.x

  17. How will the ‘molecular revolution’ contribute to biological recording?

    Biological Journal of the Linnean Society

    Volume 115, Issue 3, July 2015, Pages: 750–766, Lori Lawson Handley

    Version of Record online : 18 MAR 2015, DOI: 10.1111/bij.12516

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    Big answers from small worlds: a user's guide for protist microcosms as a model system in ecology and evolution

    Methods in Ecology and Evolution

    Volume 6, Issue 2, February 2015, Pages: 218–231, Florian Altermatt, Emanuel A. Fronhofer, Aurélie Garnier, Andrea Giometto, Frederik Hammes, Jan Klecka, Delphine Legrand, Elvira Mächler, Thomas M. Massie, Frank Pennekamp, Marco Plebani, Mikael Pontarp, Nicolas Schtickzelle, Virginie Thuillier and Owen L. Petchey

    Version of Record online : 15 DEC 2014, DOI: 10.1111/2041-210X.12312

  19. Tag jumps illuminated – reducing sequence-to-sample misidentifications in metabarcoding studies

    Molecular Ecology Resources

    Volume 15, Issue 6, November 2015, Pages: 1289–1303, Ida Bærholm Schnell, Kristine Bohmann and M. Thomas P. Gilbert

    Version of Record online : 20 MAR 2015, DOI: 10.1111/1755-0998.12402

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    Measuring telomere length and telomere dynamics in evolutionary biology and ecology

    Methods in Ecology and Evolution

    Volume 5, Issue 4, April 2014, Pages: 299–310, Daniel H. Nussey, Duncan Baird, Emma Barrett, Winnie Boner, Jennifer Fairlie, Neil Gemmell, Nils Hartmann, Thorsten Horn, Mark Haussmann, Mats Olsson, Chris Turbill, Simon Verhulst, Sandrine Zahn and Pat Monaghan

    Version of Record online : 2 MAR 2014, DOI: 10.1111/2041-210X.12161