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There are 7181 results for: content related to: Reference-free transcriptome assembly in non-model animals from next-generation sequencing data

  1. You have free access to this content
    Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species

    The Plant Journal

    Volume 84, Issue 1, October 2015, Pages: 1–19, Susete Alves-Carvalho, Grégoire Aubert, Sébastien Carrère, Corinne Cruaud, Anne-Lise Brochot, Françoise Jacquin, Anthony Klein, Chantal Martin, Karen Boucherot, Jonathan Kreplak, Corinne da Silva, Sandra Moreau, Pascal Gamas, Patrick Wincker, Jérôme Gouzy and Judith Burstin

    Version of Record online : 1 OCT 2015, DOI: 10.1111/tpj.12967

  2. The haustorial transcriptomes of Uromyces appendiculatus and Phakopsora pachyrhizi and their candidate effector families

    Molecular Plant Pathology

    Volume 15, Issue 4, May 2014, Pages: 379–393, Tobias I. Link, Patrick Lang, Brian E. Scheffler, Mary V. Duke, Michelle A. Graham, Bret Cooper, Mark L. Tucker, Martijn van de Mortel, Ralf T. Voegele, Kurt Mendgen, Thomas J. Baum and Steven A. Whitham

    Version of Record online : 17 DEC 2013, DOI: 10.1111/mpp.12099

  3. Transcriptome sequencing as a platform to elucidate molecular components of the diapause response in the Asian tiger mosquito Aedes albopictus

    Physiological Entomology

    Volume 38, Issue 2, June 2013, Pages: 173–181, MONICA F. POELCHAU, JULIE A. REYNOLDS, DAVID L. DENLINGER, CHRISTINE G. ELSIK and PETER A. ARMBRUSTER

    Version of Record online : 6 MAY 2013, DOI: 10.1111/phen.12016

  4. A large-scale gene discovery for the red palm weevil Rhynchophorus ferrugineus (Coleoptera: Curculionidae)

    Insect Science

    Volume 20, Issue 6, December 2013, Pages: 689–702, Lei Wang, Xiao-Wei Zhang, Lin-Lin Pan, Wan-Fei Liu, Da-Peng Wang, Guang-Yu Zhang, Yu-Xin Yin, An Yin, Shan-Gang Jia, Xiao-Guang Yu, Gao-Yuan Sun, Song-Nian Hu, Ibrahim S. Al-Mssallem and Jun Yu

    Version of Record online : 14 JAN 2013, DOI: 10.1111/j.1744-7917.2012.01561.x

  5. Transcriptome resources for the white-footed mouse (Peromyscus leucopus): new genomic tools for investigating ecologically divergent urban and rural populations

    Molecular Ecology Resources

    Volume 15, Issue 2, March 2015, Pages: 382–394, Stephen E. Harris, Rachel J. O'Neill and Jason Munshi-South

    Version of Record online : 16 JUL 2014, DOI: 10.1111/1755-0998.12301

  6. Developing genomic resources in two Linum species via 454 pyrosequencing and genomic reduction

    Molecular Ecology Resources

    Volume 12, Issue 3, May 2012, Pages: 492–500, YONG-BI FU and GREGORY W. PETERSON

    Version of Record online : 18 DEC 2011, DOI: 10.1111/j.1755-0998.2011.03100.x

  7. A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1192–1204, Isabelle Lesur, Alison Bechade, Céline Lalanne, Christophe Klopp, Céline Noirot, Jean-Charles Leplé, Antoine Kremer, Christophe Plomion and Grégoire Le Provost

    Version of Record online : 30 JAN 2015, DOI: 10.1111/1755-0998.12373

  8. A combined subtractive suppression hybridization and expression profiling strategy to identify novel desiccation response transcripts from Tortula ruralis gametophytes

    Physiologia Plantarum

    Volume 136, Issue 4, August 2009, Pages: 437–460, Melvin J. Oliver, Jeremy Hudgeons, Scot E. Dowd and Paxton R. Payton

    Version of Record online : 25 APR 2009, DOI: 10.1111/j.1399-3054.2009.01245.x

  9. The red coral (Corallium rubrum) transcriptome: a new resource for population genetics and local adaptation studies

    Molecular Ecology Resources

    Volume 15, Issue 5, September 2015, Pages: 1205–1215, M. Pratlong, A. Haguenauer, O. Chabrol, C. Klopp, P. Pontarotti and D. Aurelle

    Version of Record online : 22 FEB 2015, DOI: 10.1111/1755-0998.12383

  10. Genomic exploration and molecular marker development in a large and complex conifer genome using RADseq and mRNAseq

    Molecular Ecology Resources

    Volume 15, Issue 3, May 2015, Pages: 601–612, M.-J. Karam, F. Lefèvre, M. Bou Dagher-Kharrat, S. Pinosio and G.G. Vendramin

    Version of Record online : 3 OCT 2014, DOI: 10.1111/1755-0998.12329

  11. The design and cross-population application of a genome-wide SNP chip for the great tit Parus major

    Molecular Ecology Resources

    Volume 12, Issue 4, July 2012, Pages: 753–770, NIKKIE E. M. Van BERS, ANNA W. SANTURE, KEES Van OERS, ISABELLE DE CAUWER, BERT W. DIBBITS, CHRISTA MATEMAN, RICHARD P. M. A. CROOIJMANS, BEN C. SHELDON, MARCEL E. VISSER, MARTIEN A. M. GROENEN and JON SLATE

    Version of Record online : 5 APR 2012, DOI: 10.1111/j.1755-0998.2012.03141.x

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    Cell type-specific responses to salinity – the epidermal bladder cell transcriptome of Mesembryanthemum crystallinum

    New Phytologist

    Volume 207, Issue 3, August 2015, Pages: 627–644, Dong-Ha Oh, Bronwyn J. Barkla, Rosario Vera-Estrella, Omar Pantoja, Sang-Yeol Lee, Hans J. Bohnert and Maheshi Dassanayake

    Version of Record online : 5 MAY 2015, DOI: 10.1111/nph.13414

  13. Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

    Molecular Ecology

    Volume 17, Issue 7, April 2008, Pages: 1636–1647, J. CRISTOBAL VERA, CHRISTOPHER W. WHEAT, HOWARD W. FESCEMYER, MIKKO J. FRILANDER, DOUGLAS L. CRAWFORD, ILKKA HANSKI and JAMES H. MARDEN

    Version of Record online : 5 FEB 2008, DOI: 10.1111/j.1365-294X.2008.03666.x

  14. A population genomic scan in Chorthippus grasshoppers unveils previously unknown phenotypic divergence

    Molecular Ecology

    Volume 24, Issue 15, August 2015, Pages: 3918–3930, Emma L. Berdan, Camila J. Mazzoni, Isabelle Waurick, Johannes T. Roehr and Frieder Mayer

    Version of Record online : 17 JUL 2015, DOI: 10.1111/mec.13276

  15. Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages

    Methods in Ecology and Evolution

    Volume 6, Issue 8, August 2015, Pages: 883–894, Carola Gómez-Rodríguez, Alex Crampton-Platt, Martijn J. T. N. Timmermans, Andrés Baselga and Alfried P. Vogler

    Version of Record online : 27 APR 2015, DOI: 10.1111/2041-210X.12376

  16. The effects of variable sample biomass on comparative metagenomics

    Environmental Microbiology

    Volume 17, Issue 7, July 2015, Pages: 2239–2253, Meghan Chafee, Loïs Maignien and Sheri L. Simmons

    Version of Record online : 30 JAN 2015, DOI: 10.1111/1462-2920.12668

  17. De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae)

    Molecular Ecology Resources

    Volume 12, Issue 2, March 2012, Pages: 333–343, DANIEL B. SLOAN, STEPHEN R. KELLER, ANDREA E. BERARDI, BRIAN J. SANDERSON, JOHN F. KARPOVICH and DOUGLAS R. TAYLOR

    Version of Record online : 17 OCT 2011, DOI: 10.1111/j.1755-0998.2011.03079.x

  18. De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome

    Molecular Ecology Resources

    Volume 15, Issue 1, January 2015, Pages: 203–215, Péter Szövényi, Pierre-François Perroud, Aikaterini Symeonidi, Sean Stevenson, Ralph S. Quatrano, Stefan A. Rensing, Andrew C. Cuming and Stuart F. McDaniel

    Version of Record online : 13 JUN 2014, DOI: 10.1111/1755-0998.12284

  19. You have free access to this content
    Description of 31 YAC contigs spanning the majority of Arabidopsis thaliana chromosome 5

    The Plant Journal

    Volume 11, Issue 3, March 1997, Pages: 563–572, Renate Schmidt, Karina Love, Joanne West, Zoë Lenehan and Caroline Dean

    Version of Record online : 7 FEB 2003, DOI: 10.1046/j.1365-313X.1997.11030563.x

  20. You have free access to this content
    FUNCTIONAL AND POPULATION GENOMIC DIVERGENCE WITHIN AND BETWEEN TWO SPECIES OF KILLIFISH ADAPTED TO DIFFERENT OSMOTIC NICHES

    Evolution

    Volume 68, Issue 1, January 2014, Pages: 63–80, Genevieve M. Kozak, Reid S. Brennan, Emma L. Berdan, Rebecca C. Fuller and Andrew Whitehead

    Version of Record online : 17 OCT 2013, DOI: 10.1111/evo.12265