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There are 6520 results for: content related to: Estimation of metagenome size and structure in an experimental soil microbiota from low coverage next-generation sequence data

  1. Reconstructed metagenomes reveal changes of microbial functional profiling during PAHs degradation along a rice (Oryza sativa) rhizosphere gradient

    Journal of Applied Microbiology

    Volume 118, Issue 4, April 2015, Pages: 890–900, B. Ma, X.-F. Lyu, T. Zha, J. Gong, Y. He and J.-M. Xu

    Version of Record online : 4 FEB 2015, DOI: 10.1111/jam.12756

  2. Comparative metagenomics: natural populations of induced prophages demonstrate highly unique, lower diversity viral sequences

    Environmental Microbiology

    Volume 16, Issue 2, February 2014, Pages: 570–585, Lauren D. McDaniel, Karyna Rosario, Mya Breitbart and John H. Paul

    Version of Record online : 23 JUL 2013, DOI: 10.1111/1462-2920.12184

  3. Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome

    Environmental Microbiology

    Volume 14, Issue 1, January 2012, Pages: 207–227, Margret E. Berg Miller, Carl J. Yeoman, Nicholas Chia, Susannah G. Tringe, Florent E. Angly, Robert A. Edwards, Harry J. Flint, Raphael Lamed, Edward A. Bayer and Bryan A. White

    Version of Record online : 17 OCT 2011, DOI: 10.1111/j.1462-2920.2011.02593.x

  4. Metagenome-based Screening Reveals Worldwide Distribution of LOV-Domain Proteins

    Photochemistry and Photobiology

    Volume 88, Issue 1, January/February 2012, Pages: 107–118, Gopal P. Pathak, Aba Losi and Wolfgang Gärtner

    Version of Record online : 22 NOV 2011, DOI: 10.1111/j.1751-1097.2011.01024.x

  5. You have full text access to this OnlineOpen article
    Improving the genetic representation of rare taxa within complex microbial communities using DNA normalization methods

    Molecular Ecology Resources

    Volume 15, Issue 3, May 2015, Pages: 464–476, Dragana Gagic, Paul H. Maclean, Dong Li, Graeme T. Attwood and Christina D. Moon

    Version of Record online : 25 SEP 2014, DOI: 10.1111/1755-0998.12321

  6. Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs

    Environmental Microbiology

    Volume 18, Issue 3, March 2016, Pages: 863–874, Sóley Ruth Gudbergsdóttir, Peter Menzel, Anders Krogh, Mark Young and Xu Peng

    Version of Record online : 21 DEC 2015, DOI: 10.1111/1462-2920.13079

  7. Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study

    Environmental Microbiology

    Volume 14, Issue 1, January 2012, Pages: 268–281, Manuel Ferrer, Johannes Werner, Tatyana N. Chernikova, Rafael Bargiela, Lucía Fernández, Violetta La Cono, Jost Waldmann, Hanno Teeling, Olga V. Golyshina, Frank Oliver Glöckner, Michail M. Yakimov, Peter N. Golyshin and The MAMBA Scientific Consortium

    Version of Record online : 31 OCT 2011, DOI: 10.1111/j.1462-2920.2011.02634.x

  8. Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota


    Volume 15, Issue 20, October 2015, Pages: 3424–3438, Weili Xiong, Paul E. Abraham, Zhou Li, Chongle Pan and Robert L. Hettich

    Version of Record online : 28 MAY 2015, DOI: 10.1002/pmic.201400571

  9. You have free access to this content
    Potential and pitfalls of eukaryotic metagenome skimming: a test case for lichens

    Molecular Ecology Resources

    Volume 16, Issue 2, March 2016, Pages: 511–523, Bastian Greshake, Simonida Zehr, Francesco Dal Grande, Anjuli Meiser, Imke Schmitt and Ingo Ebersberger

    Version of Record online : 26 SEP 2015, DOI: 10.1111/1755-0998.12463

  10. The role of planktonic Flavobacteria in processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics

    Environmental Microbiology

    Volume 15, Issue 5, May 2013, Pages: 1302–1317, Timothy J. Williams, David Wilkins, Emilie Long, Flavia Evans, Mathew Z. DeMaere, Mark J. Raftery and Ricardo Cavicchioli

    Version of Record online : 6 NOV 2012, DOI: 10.1111/1462-2920.12017

  11. Molecular approaches to study the insect gut symbiotic microbiota at the ‘omics’ age

    Insect Science

    Volume 17, Issue 3, June 2010, Pages: 199–219, Weibing Shi, Ryan Syrenne, Jian-Zhong Sun and Joshua S. Yuan

    Version of Record online : 4 JUN 2010, DOI: 10.1111/j.1744-7917.2010.01340.x

  12. Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments

    Environmental Microbiology

    Volume 14, Issue 5, May 2012, Pages: 1333–1346, Runar Stokke, Irene Roalkvam, Anders Lanzen, Haflidi Haflidason and Ida H. Steen

    Version of Record online : 9 MAR 2012, DOI: 10.1111/j.1462-2920.2012.02716.x

  13. The Sphagnum microbiome supports bog ecosystem functioning under extreme conditions

    Molecular Ecology

    Volume 23, Issue 18, September 2014, Pages: 4498–4510, Anastasia Bragina, Lisa Oberauner-Wappis, Christin Zachow, Bettina Halwachs, Gerhard G. Thallinger, Henry Müller and Gabriele Berg

    Version of Record online : 8 SEP 2014, DOI: 10.1111/mec.12885

  14. Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study

    Environmental Microbiology Reports

    Volume 4, Issue 2, April 2012, Pages: 248–256, Blaire Steven, La Verne Gallegos-Graves, Shawn R. Starkenburg, Patrick S. Chain and Cheryl R. Kuske

    Version of Record online : 10 FEB 2012, DOI: 10.1111/j.1758-2229.2012.00328.x

  15. You have free access to this content
    Taxonomic and functional metagenomic profiling of gastrointestinal tract microbiome of the farmed adult turbot (Scophthalmus maximus)

    FEMS Microbiology Ecology

    Volume 86, Issue 3, December 2013, Pages: 432–443, Mengxin Xing, Zhanhui Hou, Jianbo Yuan, Yuan Liu, Yanmei Qu and Bin Liu

    Version of Record online : 19 JUL 2013, DOI: 10.1111/1574-6941.12174

  16. Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

    Environmental Microbiology

    Volume 15, Issue 1, January 2013, Pages: 167–182, Francesco Smedile, Enzo Messina, Violetta La Cono, Olga Tsoy, Luis S. Monticelli, Mireno Borghini, Laura Giuliano, Peter N. Golyshin, Arcady Mushegian and Michail M. Yakimov

    Version of Record online : 25 JUL 2012, DOI: 10.1111/j.1462-2920.2012.02827.x

  17. You have full text access to this OnlineOpen article
    Microbial players and processes involved in phytoplankton bloom utilization in the water column of a fast-flowing, river-dominated estuary


    Maria W. Smith, Lydie Herfort, Caroline S. Fortunato, Byron C. Crump and Holly M. Simon

    Version of Record online : 20 MAR 2017, DOI: 10.1002/mbo3.467

  18. You have free access to this content
    Sequence-based screening for self-sufficient P450 monooxygenase from a metagenome library

    Journal of Applied Microbiology

    Volume 102, Issue 5, May 2007, Pages: 1392–1400, B.S. Kim, S.Y. Kim, J. Park, W. Park, K.Y. Hwang, Y.J. Yoon, W.K. Oh, B.Y. Kim and J.S. Ahn

    Version of Record online : 27 SEP 2006, DOI: 10.1111/j.1365-2672.2006.03169.x

  19. Microbial community adaptation to quaternary ammonium biocides as revealed by metagenomics

    Environmental Microbiology

    Volume 15, Issue 10, October 2013, Pages: 2850–2864, Seungdae Oh, Madan Tandukar, Spyros G. Pavlostathis, Patrick S. G. Chain and Konstantinos T. Konstantinidis

    Version of Record online : 3 JUN 2013, DOI: 10.1111/1462-2920.12154

  20. Metaproteomics: Extracting and Mining Proteome Information to Characterize Metabolic Activities in Microbial Communities


    Current Protocols in Bioinformatics


    Paul E. Abraham, Richard J. Giannone, Weili Xiong and Robert L. Hettich

    Published Online : 17 JUN 2014, DOI: 10.1002/0471250953.bi1326s46