Current Protocols in Molecular Biology

Current Protocols in Molecular Biology

Online ISBN: 9780471142720

DOI: 10.1002/0471142727

Browse by Topic

  1. Bioinformatics
  2. Cell Biology
  3. Cell Culture
  4. Chemical Biology
  5. Cytometry
  6. Gene Expression
  7. Genetics and Genomics
  8. Imaging and Microscopy
  9. Immunology
  10. Intermolecular Interactions
  11. Laboratory Organisms and Animal Models
  12. Microbiology
  13. Microbiology
  14. Molecular Biology
  15. Molecular Biology
    1. Carbohydrate Analysis
    2. Chromatin Assembly and Analysis
      1. Assembly of Nucleosomal Templates by Salt Dialysis
      2. ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide
      3. Genome-Wide Location Analysis by Pull Down of In Vivo Biotinylated Transcription Factors
      4. ChIP-chip for Genome-Wide Analysis of Protein Binding in Mammalian Cells
      5. ChIP-exo Method for Identifying Genomic Location of DNA-Binding Proteins with Near-Single-Nucleotide Accuracy
      6. ChIP-Seq: A Method for Global Identification of Regulatory Elements in the Genome
      7. Chromatin Assembly Using Drosophila Systems
      8. Chromatin Immunoprecipitation for Determining the Association of Proteins with Specific Genomic Sequences In Vivo
      9. Mapping Chromatin Interactions by Chromosome Conformation Capture
      10. Chromosome Conformation Capture Carbon Copy Technology
      11. DamIP: Using Mutant DNA Adenine Methyltransferase to Study DNA-Protein Interactions In Vivo
      12. Defining In Vivo Targets of Nuclear Proteins by Chromatin Immunoprecipitation and Microarray Analysis
      13. DNase I and Hydroxyl Radical Characterization of Chromatin Complexes
      14. A Detailed Protocol for Formaldehyde-Assisted Isolation of Regulatory Elements (FAIRE)
      15. Genome-Wide Analysis of Nucleosome Positions, Occupancy, and Accessibility in Yeast: Nucleosome Mapping, High-Resolution Histone ChIP, and NCAM
      16. Isolation of Histones and Nucleosome Cores from Mammalian Cells
      17. Genome-Scale Mapping of DNase I Hypersensitivity
      18. Mapping Networks of Protein-Mediated Physical Interactions Between Chromatin Elements
      19. MARCC (Matrix-Assisted Reader Chromatin Capture): An Antibody-Free Method to Enrich and Analyze Combinatorial Nucleosome Modifications
      20. Methylation-Sensitive Single-Molecule Analysis of Chromatin Structure
      21. Micrococcal Nuclease Analysis of Chromatin Structure
      22. Paired-End diTagging for Transcriptome and Genome Analysis
      23. Chromatin Interaction Analysis Using Paired-End Tag Sequencing
      24. Separation of Histone Variants and Post-Translationally Modified Isoforms by Triton/Acetic Acid/Urea Polyacrylamide Gel Electrophoresis
      25. Identifying Chromosomal Targets of DNA-Binding Proteins by Sequence Tag Analysis of Genomic Enrichment (STAGE)
      26. Analysis of Protein Co-Occupancy by Quantitative Sequential Chromatin Immunoprecipitation
      27. Simultaneous Single-Molecule Mapping of Protein-DNA Interactions and DNA Methylation by MAPit
      28. Installation of Site-Specific Methylation into Histones Using Methyl Lysine Analogs
    3. Cloning and Recombination Methods
    4. Combinatorial Methods
    5. DNA-Protein Interactions
    6. E. coli, Plasmids, and Bacteriophages
    7. Enzymatic Manipulation of DNA and RNA
    8. Expression Analysis
    9. Gene Expression
    10. Gene Regulation
    11. Gene Silencing
    12. Informatics
    13. Introduction of DNA into Cells
    14. Labeling Methods
    15. Libraries
    16. Molecular Interactions
    17. Mouse Methods
    18. Mutagenesis
    19. Nucleic Acid Arrays
    20. Polymerase Chain Reaction
    21. Post-Translational Modification
    22. Preparation and Analysis of DNA and RNA
    23. Protein Analysis
    24. Protein Expression
    25. Recombinant DNA Libraries
    26. RNA-Protein Interactions
    27. Sequencing
    28. Yeast Methods
  16. Mouse Biology
  17. Nucleic Acid Chemistry
  18. Pharmacology and Drug Discovery
  19. Protein Production, Purification, and Analysis
  20. Proteomics
  21. RNA
  22. Safety
  23. Stem Cells
  24. Structural Analysis of Biomolecules
  25. Supporting Lab Techniques
  26. Toxicology