Current Protocols in Bioinformatics

Copyright © 1999-2012 by John Wiley and Sons, Inc. All Rights Reserved.

Current Protocols in Bioinformatics

Online ISBN: 9780471250951

DOI: 10.1002/0471250953

Browse by Topic

  1. Bioinformatics
  2. Bioinformatics
    1.  
    2. Bioinformatics Fundamentals
    3. Biological Databases
    4. Cheminformatics
    5. DNA Analysis
    6. Expression Patterns
    7. Finding Genes
    8. Finding Similarities and Inferring Homologies
    9. Genome Variation
    10. Metabolomics
    11. Modeling Structure from Sequence
    12. Molecular Modeling
    13. Pathways and Molecular Interactions
    14. Phylogenetic Analysis
      1. Getting a Tree Fast: Neighbor Joining, FastME, and Distance-Based Methods
      2. Inference of Episodic Changes in Natural Selection Acting on Protein Coding Sequences via CODEML
      3. Inferring Evolutionary Trees with PAUP*
      4. Inferring Protein Function from Homology Using the Princeton Protein Orthology Database (P-POD)
      5. Installing and Configuring CMap
      6. Maximum-Likelihood Analysis Using TREE-PUZZLE
      7. Phylogenetic Analysis with the iPlant Discovery Environment
      8. You have free access to this content
        Phylogenetic Inference Using RevBayes
      9. Phylogenomic Inference of Protein Molecular Function
      10. Studying RNA Homology and Conservation with Infernal: From Single Sequences to RNA Families
      11. Using MODELTEST and PAUP* to Select a Model of Nucleotide Substitution
      12. You have free access to this content
        Using OrthoMCL to Assign Proteins to OrthoMCL-DB Groups or to Cluster Proteomes Into New Ortholog Groups
      13. Using PEBBLE for the Evolutionary Analysis of Serially Sampled Molecular Sequences
      14. Using QIIME to Analyze 16S rRNA Gene Sequences from Microbial Communities
      15. Using RAxML to Infer Phylogenies
      16. Visualizing Phylogenetic Trees Using TreeView
      17. What If I Don't Have a Tree?: Split Decomposition and Related Models
      18. Getting a Tree Fast: Neighbor Joining, FastME, and Distance-Based Methods
      19. Inference of Episodic Changes in Natural Selection Acting on Protein Coding Sequences via CODEML
      20. Inferring Evolutionary Trees with PAUP*
      21. Inferring Protein Function from Homology Using the Princeton Protein Orthology Database (P-POD)
      22. Installing and Configuring CMap
      23. Maximum-Likelihood Analysis Using TREE-PUZZLE
      24. Phylogenetic Analysis with the iPlant Discovery Environment
      25. You have free access to this content
        Phylogenetic Inference Using RevBayes
      26. Phylogenomic Inference of Protein Molecular Function
      27. Studying RNA Homology and Conservation with Infernal: From Single Sequences to RNA Families
      28. Using MODELTEST and PAUP* to Select a Model of Nucleotide Substitution
      29. You have free access to this content
        Using OrthoMCL to Assign Proteins to OrthoMCL-DB Groups or to Cluster Proteomes Into New Ortholog Groups
      30. Using PEBBLE for the Evolutionary Analysis of Serially Sampled Molecular Sequences
      31. Using QIIME to Analyze 16S rRNA Gene Sequences from Microbial Communities
      32. Using RAxML to Infer Phylogenies
      33. Visualizing Phylogenetic Trees Using TreeView
      34. What If I Don't Have a Tree?: Split Decomposition and Related Models
    15. Protein Analysis
    16. Proteomics
    17. Recognizing Functional Domains
    18. RNA Analysis
    19. Sequence Mapping and Assembly
  3. Cell Biology
  4. Chemical Biology
  5. Gene Expression
  6. Genetics and Genomics
  7. Genetics and Genomics
  8. Intermolecular Interactions
  9. Intermolecular Interactions
  10. Microbiology
  11. Molecular Biology
  12. Nucleic Acid Chemistry
  13. Pharmacology and Drug Discovery
  14. Protein Production, Purification, and Analysis
  15. Proteomics
  16. RNA
  17. Structural Analysis of Biomolecules
  18. Supporting Lab Techniques

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