Current Protocols in Bioinformatics

Current Protocols in Bioinformatics

Online ISBN: 9780471250951

DOI: 10.1002/0471250953

Browse by Topic

  1. Bioinformatics
  2. Bioinformatics
    1. Bioinformatics Fundamentals
    2. Biological Databases
    3. Cheminformatics
    4. DNA Analysis
    5. Expression Patterns
    6. Finding Genes
    7. Finding Similarities and Inferring Homologies
    8. Genome Variation
    9. Modeling Structure from Sequence
    10. Molecular Modeling
    11. Phylogenetic Trees
    12. Protein Analysis
      1. Access Guide to Human Proteinpedia
      2. Active Site Profiling to Identify Protein Functional Sites in Sequences and Structures Using the Deacon Active Site Profiler (DASP)
      3. Analyzing Molecular Interactions
      4. Analyzing Shotgun Proteomic Data with PatternLab for Proteomics
      5. Byonic: Advanced Peptide and Protein Identification Software
      6. Census for Proteome Quantification
      7. Comparative Protein Structure Modeling Using MODELLER
      8. Using the DFCI Gene Index Databases for Biological Discovery
      9. FAMS and FAMSBASE for Protein Structure
      10. Identifying Proteomic LC-MS/MS Data Sets with Bumbershoot and IDPicker
      11. Investigating Protein Structure and Evolution with SCOP2
      12. Computing Multiple Sequence/Structure Alignments with the T-Coffee Package
      13. PatternLab: From Mass Spectra to Label-Free Differential Shotgun Proteomics
      14. Identification of Peptide Features in Precursor Spectra Using Hardklör and Krönik
      15. Predicting Peptide Retention Times for Proteomics
      16. Protein Function Prediction: Problems and Pitfalls
      17. Protein Structure and Function Prediction Using I-TASSER
      18. Searching and Navigating UniProt Databases
      19. STRAP PTM: Software Tool for Rapid Annotation and Differential Comparison of Protein Post-Translational Modifications
      20. Structure-Based pKa Calculations Using Continuum Electrostatics Methods
      21. Using CATH-Gene3D to Analyze the Sequence, Structure, and Function of Proteins
      22. Using DelPhi to Compute Electrostatic Potentials and Assess Their Contribution to Interactions
      23. Using the MEROPS Database for Proteolytic Enzymes and Their Inhibitors and Substrates
    13. Proteomics
    14. Recognizing Functional Domains
    15. RNA Analysis
    16. Sequence Mapping and Assembly
  3. Cell Biology
  4. Chemical Biology
  5. Gene Expression
  6. Genetics and Genomics
  7. Genetics and Genomics
  8. Intermolecular Interactions
  9. Intermolecular Interactions
  10. Microbiology
  11. Molecular Biology
  12. Nucleic Acid Chemistry
  13. Pharmacology and Drug Discovery
  14. Protein Production, Purification, and Analysis
  15. Proteomics
  16. RNA
  17. Structural Analysis of Biomolecules
  18. Supporting Lab Techniques