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Proteins: Structure, Function, and Bioinformatics

Copyright © 2012 Wiley Periodicals Inc.

Cover image for Proteins: Structure, Function, and Bioinformatics

1 June 2000

Volume 39, Issue 4

Pages 271–420

  1. Research Articles

    1. Top of page
    2. Research Articles
    1. Crystal structure of human ornithine transcarbamylase complexed with carbamoyl phosphate and L-norvaline at 1.9 Å resolution (pages 271–277)

      Dashuang Shi, Hiroki Morizono, Mika Aoyagi, Mendel Tuchman and Norma M. Allewell

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<271::AID-PROT10>3.0.CO;2-E

    2. Trans-substitution of the proximal hydrogen bond in myoglobin: I. Structural consequences of hydrogen bond deletion (pages 278–290)

      Doug Barrick and Frederick W. Dahlquist

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<278::AID-PROT20>3.0.CO;2-T

    3. Trans-substitution of the proximal hydrogen bond in myoglobin: II. Energetics, functional consequences, and implications for hemoglobin allostery (pages 291–308)

      Doug Barrick

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<291::AID-PROT30>3.0.CO;2-A

    4. Use of MM-PB/SA in estimating the free energies of proteins: Application to native, intermediates, and unfolded villin headpiece (pages 309–316)

      Matthew R. Lee, Yong Duan and Peter A. Kollman

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<309::AID-PROT40>3.0.CO;2-S

    5. Electrostatic properties of bovine β-lactoglobulin (pages 317–330)

      Federico Fogolari, Laura Ragona, Stefania Licciardi, Silvia Romagnoli, Roberta Michelutti, Raffaella Ugolini and Henriette Molinari

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<317::AID-PROT50>3.0.CO;2-W

    6. Conservation of polar residues as hot spots at protein interfaces (pages 331–342)

      Zengjian Hu, Buyong Ma, Haim Wolfson and Ruth Nussinov

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<331::AID-PROT60>3.0.CO;2-A

    7. Comparative modeling studies of the calmodulin-like domain of calcium-dependent protein kinase from soybean (pages 343–357)

      Aalim M. Weljie, Teresa E. Clarke, André H. Juffer, Alice C. Harmon and Hans J. Vogel

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<343::AID-PROT70>3.0.CO;2-2

    8. Sequence and structural determinants of mannose recognition (pages 358–364)

      Gosu Ramachandraiah and Nagasuma R. Chandra

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<358::AID-PROT80>3.0.CO;2-M

    9. Exploration of the Smath image subsite of neprilysin: A joined molecular modeling and site-directed mutagenesis study (pages 365–371)

      Cynthia Marie-Claire, Gilles Tiraboschi, Emmanuel Ruffet, Nicolas Inguimbert, Marie-Claude Fournie-Zaluski and Bernard P. Roques

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<365::AID-PROT90>3.0.CO;2-T

    10. BiGGER: A new (soft) docking algorithm for predicting protein interactions (pages 372–384)

      P. Nuno Palma, Ludwig Krippahl, John E. Wampler and José J.G. Moura

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<372::AID-PROT100>3.0.CO;2-Q

    11. Modified genetic algorithm resolves ambiguous NOE restraints and reduces unsightly NOE violations (pages 385–392)

      Marc Adler

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<385::AID-PROT110>3.0.CO;2-J

    12. Examining methods for calculations of binding free energies: LRA, LIE, PDLD-LRA, and PDLD/S-LRA calculations of ligands binding to an HIV protease (pages 393–407)

      Yuk Yin Sham, Zhen Tao Chu, Holly Tao and Arieh Warshel

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<393::AID-PROT120>3.0.CO;2-H

    13. Transcriptional repressor CopR: Amino acids involved in forming the dimeric interface (pages 408–416)

      Katrin Steinmetzer, Alexander Hillisch, Joachim Behlke and Sabine Brantl

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<408::AID-PROT130>3.0.CO;2-0

    14. Do more complex organisms have a greater proportion of membrane proteins in their genomes? (pages 417–420)

      Timothy J. Stevens and Isaiah T. Arkin

      Article first published online: 11 MAY 2000 | DOI: 10.1002/(SICI)1097-0134(20000601)39:4<417::AID-PROT140>3.0.CO;2-Y

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