Prokaryotic gene identification in silico
Part 4. Bioinformatics
4.2. Gene Finding and Gene Structure
Published Online: 15 OCT 2004
Copyright © 2005 John Wiley & Sons, Ltd
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics
How to Cite
Borodovsky, M. and Azad, R. 2004. Prokaryotic gene identification in silico. Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics. 4:4.2:13.
- Published Online: 15 OCT 2004
This review covers major lines of development of the gene finding methods for prokaryotic genomes in the last two decades. We describe general ideas behind the algorithms using statistical pattern recognition and dynamic programming, as well as evolutionary relationships between genes and proteins.
- gene recognition;
- gene finding in bacterial and archaeal genomes;
- gene prediction in prokaryotes