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Chapter 11. Information Flow and Data Integration of Databanks

  1. Arthur M. Lesk
  1. C. H. Wu1,
  2. W. C. Barker2

Published Online: 8 JUN 2005

DOI: 10.1002/0470012420.ch11

Book Title

Database Annotation in Molecular Biology

Database Annotation in Molecular Biology

Additional Information

How to Cite

Wu, C. H. and Barker, W. C. (2005) Information Flow and Data Integration of Databanks, in Database Annotation in Molecular Biology (ed A. M. Lesk), John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/0470012420.ch11

Editor Information

  1. Department of Biochemistry and Molecular Biology, The Pennsylvania State University, 512 Wartik Laboratory, University Park, PA 16802, USA

Author Information

  1. 1

    Georgetown University Medical Center, 3900 Reservoir Road NW, Box 571455, Washington, D.C. 20057-1455, USA

  2. 2

    National Biomedical Research Foundation, 3900 Reservoir Road NW, Box 571414, Washington, D.C. 20057-1414, USA

Publication History

  1. Published Online: 8 JUN 2005
  2. Published Print: 26 NOV 2004

ISBN Information

Print ISBN: 9780470856819

Online ISBN: 9780470012420

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CHAPTER TOOLS

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Keywords:

  • The database unique identifier (UID);
  • Protein name;
  • protein sequences;
  • eXtensible Markup Language;
  • genome annotation errors;
  • error propagation;
  • transitive catastrophe;
  • functional annotation errors;
  • data integration

Summary

This chapter contains sections titled:

  • Introduction

  • Information Flow Among Databanks

  • Database Distribution Format

  • Genome Annotation Errors and Error Propagation

  • Data Integration and Knowledge Discovery: iProClass Case Study

  • Conclusions

  • Acknowledgements

  • References

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