Chapter 8. Annotation of Protein Sequences
- Arthur M. Lesk
Published Online: 8 JUN 2005
DOI: 10.1002/0470012420.ch8
Copyright © 2005 John Wiley & Sons, Ltd
Book Title
Database Annotation in Molecular Biology
Additional Information
How to Cite
Barker, W. C. and Wu, C. H. (2005) Annotation of Protein Sequences, in Database Annotation in Molecular Biology (ed A. M. Lesk), John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/0470012420.ch8
Editor Information
Department of Biochemistry and Molecular Biology, The Pennsylvania State University, 512 Wartik Laboratory, University Park, PA 16802, USA
Publication History
- Published Online: 8 JUN 2005
- Published Print: 26 NOV 2004
ISBN Information
Print ISBN: 9780470856819
Online ISBN: 9780470012420
- Summary
- Chapter
Keywords:
- Protein sequence databases;
- UniProt;
- Protein Information Resource (PIR);
- InterPro;
- PIR superfamily;
- automated annotation;
- glycosyltransferase;
- hexosyltransferase';
- signal sequence
Summary
This chapter contains sections titled:
Introduction
What is Annotation?
UniProt: Universal Protein Resource
Protein Family Classification
InterPro: Integrated Resource of Protein Families, Domains and Sites
PIR Protein Families and Superfamilies
Ontologies
Protein Names, Source Information and Unique Identifiers
Common Identification Errors
Evidence Attribution
Position Specific Annotations
Rule-based Annotation
Conclusions
Acknowledgements
References