18. Applications

  1. Michael Moorhouse1 and
  2. Paul Barry2

Published Online: 8 JUN 2005

DOI: 10.1002/0470020571.ch18

Bioinformatics Biocomputing and Perl: An Introduction to Bioinformatics Computing Skills and Practice

Bioinformatics Biocomputing and Perl: An Introduction to Bioinformatics Computing Skills and Practice

How to Cite

Moorhouse, M. and Barry, P. (2004) Applications, in Bioinformatics Biocomputing and Perl: An Introduction to Bioinformatics Computing Skills and Practice, John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/0470020571.ch18

Author Information

  1. 1

    Post-Doctoral Worker from Erasmus MC, The Netherlands

  2. 2

    Department of Computing and Networking, Institute of Technology, Carlow, Ireland

Publication History

  1. Published Online: 8 JUN 2005
  2. Published Print: 26 MAY 2004

ISBN Information

Print ISBN: 9780470853313

Online ISBN: 9780470020579

SEARCH

Keywords:

  • Bioinformatics;
  • Mer Operon;
  • repressors;
  • transposon;
  • BLAST Sequence;
  • GeneMark;
  • ORF, open reading frame;
  • homology modelling;
  • DeepView

Summary

This chapter contains sections titled

  • Introduction

  • Scientific Background to Mer Operon

  • Downloading the Raw DNA Sequence

  • Initial BLAST Sequence Similarity Search

  • GeneMark

  • Structural Prediction with SWISS-MODEL

  • DeepView as a Structural Alignment Tool

  • PROSITE and Sequence Motifs

  • Phylogenetics

  • Where to from Here?

  • The Maxims Repeated