Unit

UNIT 1.1 The Importance of Biological Databases in Biological Discovery

  1. Andreas D. Baxevanis

Published Online: 1 MAR 2006

DOI: 10.1002/0471250953.bi0101s13

Current Protocols in Bioinformatics

Current Protocols in Bioinformatics

How to Cite

Baxevanis, A. D. 2006. The Importance of Biological Databases in Biological Discovery. Current Protocols in Bioinformatics. 13:1.1:1.1.1–1.1.5.

Author Information

  1. Bethesda, Maryland

Publication History

  1. Published Online: 1 MAR 2006
  2. Published Print: FEB 2006

This is not the most recent version of the article. View current version (19 JUN 2015)

Abstract

Biological databases play a central role in bioinformatics. They offer scientists the opportunity to access sequence and structure data for tens of thousands of sequences from a broad range of organisms. This unit provides a brief overview of major sequence databases and portals, such as GenBank, UCSC Genome Browser, and Ensembl. Model organism databases, including the TIGR Gene Indices, WormBase, and the Arabidopsis Information Resource (TAIR) are also covered. Non-sequence-centric databases such as Online Mendelian Inheritance in Man (OMIM), the Protein Data Bank (PDB), and the Kyoto Encyclopedia of Genes and Genomes (KEGG) are also discussed.

Keywords:

  • biological database;
  • sequence database;
  • structure database;
  • model organisms;
  • biological pathways