Unit

UNIT 9.14 Administering GBrowse Sites with WebGBrowse

  1. Ram Podicheti1,
  2. Qunfeng Dong2

Published Online: 1 MAR 2011

DOI: 10.1002/0471250953.bi0914s33

Lab Protocol Title

Current Protocols in Bioinformatics

Current Protocols in Bioinformatics

Additional Information

How to Cite

Podicheti, R. and Dong, Q. 2011. Administering GBrowse Sites with WebGBrowse. Current Protocols in Bioinformatics. 33:9.14:9.14.1–9.14.9.

Author Information

  1. 1

    Indiana University, Bloomington, Indiana

  2. 2

    University of North Texas, Denton, Texas

Publication History

  1. Published Online: 1 MAR 2011
  2. Published Print: MAR 2011
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Abstract

GBrowse is widely used by biologists to visualize genome annotation. We have developed WebGBrowse to facilitate hosting multiple GBrowse instances specific for different users on the same Web server. WebGBrowse automatically sets up each user-specific GBrowse instance by extracting information from user-supplied data to produce the appropriate configuration. This unit describes installation and administration of WebGBrowse for bioinformaticians who plan to manage local WebGBrowse servers in their institutions.Curr. Protoc. Bioinform. 33:9.14.1-9.14.9. © 2011 by John Wiley & Sons, Inc.

Keywords:

  • Genome Browser;
  • WebGBrowse;
  • GBrowse;
  • GMOD;
  • visualization;
  • genome;
  • annotation
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