Unit
UNIT 12.2 RNA Secondary Structure Analysis Using the Vienna RNA Package
Published Online: 1 JUN 2009
DOI: 10.1002/0471250953.bi1202s26
Copyright © 2009 by John Wiley & Sons, Inc.
Lab Protocol Title
Current Protocols in Bioinformatics
Additional Information
How to Cite
Hofacker, I. L. 2009. RNA Secondary Structure Analysis Using the Vienna RNA Package. Current Protocols in Bioinformatics. 26:12.2:12.2.1–12.2.16.
Publication History
- Published Online: 1 JUN 2009
- Published Print: JUN 2009
Abstract
This unit documents how to use the Vienna RNA package for RNA secondary structure analysis. Possible tasks include structure prediction for single sequences, prediction of consensus structures, prediction of RNA-RNA interactions, and sequence design. Curr. Protoc. Bioinform. 26:12.2.1-12.2.16. © 2009 by John Wiley & Sons, Inc.
Keywords:
- structure prediction;
- secondary structure;
- RNA structure;
- consensus structure;
- sequence design;
- RNA interactions
