9. Bioinformatics

  1. Christopher A. Cullis

Published Online: 26 JAN 2004

DOI: 10.1002/0471488577.ch9

Plant Genomics and Proteomics

Plant Genomics and Proteomics

How to Cite

Cullis, C. A. (2003) Bioinformatics, in Plant Genomics and Proteomics, John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/0471488577.ch9

Publication History

  1. Published Online: 26 JAN 2004
  2. Published Print: 24 DEC 2003

ISBN Information

Print ISBN: 9780471373148

Online ISBN: 9780471488576

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Keywords:

  • databases;
  • sequence analysis;
  • clustering;
  • BLAST;
  • comparative genomics

Summary

The enormous quantities of data have to be housed in appropriate databases and tools made available with which these data can be analyzed. Sequences have to be assembled, clustered, and annotated. ESTs have to be collapsed into unigene sets. Alignments across taxa are important to identify control regions and significance tests are important to identify important conserved regions. Protein structural information and domain recognition are importantly overlaid on nucleic acid sequence data.