Chapter 9. Engineering Protein Evolution

  1. Dr. Susanne Brakmann2,
  2. Prof. Dr. Kai Johnsson3
  1. Dr. Stefan Lutz,
  2. Prof. Dr. Stephen J. Benkovic

Published Online: 28 MAR 2003

DOI: 10.1002/3527600647.ch9

Directed Molecular Evolution of Proteins: or How to Improve Enzymes for Biocatalysis

Directed Molecular Evolution of Proteins: or How to Improve Enzymes for Biocatalysis

How to Cite

Lutz, S. and Benkovic, S. J. (2003) Engineering Protein Evolution, in Directed Molecular Evolution of Proteins: or How to Improve Enzymes for Biocatalysis (eds S. Brakmann and K. Johnsson), Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, FRG. doi: 10.1002/3527600647.ch9

Editor Information

  1. 2

    AG “Angewandte Molekulare Evolution”, Institut für Spezielle Zoologie, Universität Leipzig, Talstraße 33, D-04103 Leipzig, Germany

  2. 3

    Insitute of Molecular and Biological Chemistry, Swiss Federal Institute of Technology Lausanne, CH-1015 Lausanne, Switzerland

Author Information

  1. Department of Chemistry, The Pennsylvania State University, 414 Wartik Laboratory, University Park, Pennsylvania 16802, USA

Publication History

  1. Published Online: 28 MAR 2003
  2. Published Print: 22 APR 2002

ISBN Information

Print ISBN: 9783527304233

Online ISBN: 9783527600649

SEARCH

Keywords:

  • protein evolution;
  • gene duplication;
  • circular permutation;
  • oligomerization;
  • gene fusion;
  • exon shuffling;
  • protein folding;
  • modular

Summary

This chapter contains sections titled:

  • Introduction

  • Mechanisms of Protein Evolution in Nature

    • Gene duplication

    • Tandem duplication

    • Circular permutation

    • Oligomerization

    • Gene fusion

    • Domain recruitment

    • Exon shuffling

  • Engineering Genes and Gene Fragments

    • Protein fragmentation

    • Rational swapping of secondary structure elements and domains

    • Combinatorial gene fragment shuffling

    • Modular recombination and protein folding

    • Rational domain assembly engineering zinc fingers

    • Combinatorial domain recombination exon shuffling

  • Gene Fusion From Bi- to Multifunctional Enzymes

    • End-to-end gene fusions

    • Gene insertions

    • Modular design in multifunctional enzymes

  • Perspectives