15. DNA Fragment Assembly Using Grid Systems

  1. El-Ghazali Talbi2 and
  2. Albert Y. Zomaya3
  1. Antonio J. Nebro,
  2. Gabriel Luque and
  3. Enrique Alba

Published Online: 30 APR 2007

DOI: 10.1002/9780470191637.ch15

Grid Computing for Bioinformatics and Computational Biology

Grid Computing for Bioinformatics and Computational Biology

How to Cite

Nebro, A. J., Luque, G. and Alba, E. (2007) DNA Fragment Assembly Using Grid Systems, in Grid Computing for Bioinformatics and Computational Biology (eds E.-G. Talbi and A. Y. Zomaya), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470191637.ch15

Editor Information

  1. 2

    LIFL, University of Lille, INRIA, CNRS, Lille, France

  2. 3

    School of Information Technology, University of Sydney, Sydney, Australia

Author Information

  1. Department of Computer Language and Science, ETSI Informatica, Campus Teatinos, Malaga, Spain

Publication History

  1. Published Online: 30 APR 2007
  2. Published Print: 3 DEC 2007

ISBN Information

Print ISBN: 9780471784098

Online ISBN: 9780470191637

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Keywords:

  • whole genome assembler (WGA);
  • traveling salesman problem (TSP);
  • grid-enabled GA

Summary

This chapter contains sections titled:

  • Introduction

  • The DNA Fragment Assembly Problem

  • Software Tools for the DNA Fragment Assembly Problem

  • An Example: A Grid-Based EA for Solving the DNA Fragment Assembly Problem

  • Conclusions

  • Acknowledgments

  • References