12. Recent Developments in Alignment and Motif Finding for Sequences and Networks

  1. Ion I. Mǎndoiu2 and
  2. Alexander Zelikovsky3
  1. Sing-Hoi Sze

Published Online: 9 AUG 2007

DOI: 10.1002/9780470253441.ch12

Bioinformatics Algorithms: Techniques and Applications

Bioinformatics Algorithms: Techniques and Applications

How to Cite

Sze, S.-H. (2008) Recent Developments in Alignment and Motif Finding for Sequences and Networks, in Bioinformatics Algorithms: Techniques and Applications (eds I. I. Mǎndoiu and A. Zelikovsky), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470253441.ch12

Editor Information

  1. 2

    Department of Computer Science and Engineering, University of Connecticut, Storrs, Connecticut, USA

  2. 3

    Department of Computer Science, Georgia State University, Atlanta, GA, USA

Author Information

  1. Departments of Computer Science and of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, USA

Publication History

  1. Published Online: 9 AUG 2007
  2. Published Print: 8 FEB 2008

ISBN Information

Print ISBN: 9780470097731

Online ISBN: 9780470253441

SEARCH

Keywords:

  • pair-HMM model;
  • segment-to-segment approach;
  • structure-based alignments

Summary

This chapter contains sections titled:

  • Introduction

  • Multiple Sequence Alignment

  • Motif Finding

  • Biological Network Analysis

  • Discussion

  • References