15. Meta-Analysis of Microarray Data

  1. Ion I. Mǎndoiu4 and
  2. Alexander Zelikovsky5
  1. Saumyadipta Pyne1,
  2. Steve Skiena2 and
  3. Bruce Futcher3

Published Online: 9 AUG 2007

DOI: 10.1002/9780470253441.ch15

Bioinformatics Algorithms: Techniques and Applications

Bioinformatics Algorithms: Techniques and Applications

How to Cite

Pyne, S., Skiena, S. and Futcher, B. (2007) Meta-Analysis of Microarray Data, in Bioinformatics Algorithms: Techniques and Applications (eds I. I. Mǎndoiu and A. Zelikovsky), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470253441.ch15

Editor Information

  1. 4

    Department of Computer Science and Engineering, University of Connecticut, Storrs, Connecticut, USA

  2. 5

    Department of Computer Science, Georgia State University, Atlanta, GA, USA

Author Information

  1. 1

    The Broad Institute of MIT and Harvard, Cambridge, MA, USA

  2. 2

    Department of Computer Science, Stony Brook University, Stony Brook, NY, USA

  3. 3

    Department of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, NY, USA

Publication History

  1. Published Online: 9 AUG 2007
  2. Published Print: 8 FEB 2008

ISBN Information

Print ISBN: 9780470097731

Online ISBN: 9780470253441

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Keywords:

  • genome-wide datasets;
  • microarray meta-analysis;
  • Integration-driven discovery rate

Summary

This chapter contains sections titled:

  • Introduction

  • Combining Effect Sizes

  • Bayesian Meta-Analysis

  • Combining Probabilities

  • FDR and IDR

  • Oncomine: A Resource for Meta-Analysis

  • Acknowledgments

  • References