5. Sorting- and FFT-Based Techniques in the Discovery of Biopatterns

  1. Ion I. Mǎndoiu1 and
  2. Alexander Zelikovsky2
  1. Sudha Balla,
  2. Sanguthevar Rajasekaran and
  3. Jaime Davila

Published Online: 9 AUG 2007

DOI: 10.1002/9780470253441.ch5

Bioinformatics Algorithms: Techniques and Applications

Bioinformatics Algorithms: Techniques and Applications

How to Cite

Balla, S., Rajasekaran, S. and Davila, J. (2008) Sorting- and FFT-Based Techniques in the Discovery of Biopatterns, in Bioinformatics Algorithms: Techniques and Applications (eds I. I. Mǎndoiu and A. Zelikovsky), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470253441.ch5

Editor Information

  1. 1

    Department of Computer Science and Engineering, University of Connecticut, Storrs, Connecticut, USA

  2. 2

    Department of Computer Science, Georgia State University, Atlanta, GA, USA

Author Information

  1. Department of Computer Science and Engineering, University of Connecticut, Storrs, Connecticut, USA

Publication History

  1. Published Online: 9 AUG 2007
  2. Published Print: 8 FEB 2008

ISBN Information

Print ISBN: 9780470097731

Online ISBN: 9780470253441

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Keywords:

  • messenger RNA (mRNA) and short-interference RNAs (siRNAs);
  • neurological disorders and cancers;
  • gene-based therapy

Summary

This chapter contains sections titled:

  • Introduction

  • Sorting and Biopattern Discovery

  • Motif Discovery and Related Problems

  • FFT-Based Algorithms for Similarity Measurement

  • Summary

  • Acknowledgments

  • References