Chapter 9. Building Workflows that Traverse the Bioinformatics Data Landscape

  1. Werner Dubitzky
  1. Robert Stevens,
  2. Paul Fisher,
  3. Jun Zhao,
  4. Carole Goble and
  5. Andy Brass

Published Online: 22 JUN 2009

DOI: 10.1002/9780470699904.ch9

Data Mining Techniques in Grid Computing Environments

Data Mining Techniques in Grid Computing Environments

How to Cite

Stevens, R., Fisher, P., Zhao, J., Goble, C. and Brass, A. (2009) Building Workflows that Traverse the Bioinformatics Data Landscape, in Data Mining Techniques in Grid Computing Environments (ed W. Dubitzky), John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/9780470699904.ch9

Editor Information

  1. Biomedical Sciences Research Institute, University of Ulster, Coleraine, United Kingdom

Author Information

  1. University of Manchester, School of Computer Science, Manchester, United Kingdom

Publication History

  1. Published Online: 22 JUN 2009
  2. Published Print: 14 NOV 2008

ISBN Information

Print ISBN: 9780470512586

Online ISBN: 9780470699904

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Keywords:

  • bioinformatics data landscape;
  • taverna in bioinformatics experiment;
  • building workflows and bioinformatics data landscape;
  • SCUFL model and Taverna workflow;
  • Taverna user interface and workflow design support;
  • KEGG pathway database;
  • workflow case study;
  • myGrid's Taverna and workflow management system

Summary

This chapter contains sections titled:

  • Introduction

  • The bioinformatics data landscape

  • The bioinformatics experiment landscape

  • Taverna for bioinformatics experiments

  • Building workflows in Taverna

  • Workflow case study

  • Discussion

  • References