Chapter 11. Integrating Prediction of Structure, Function, and Interactions
- Janusz M. Bujnicki2,3
Published Online: 18 DEC 2008
DOI: 10.1002/9780470741894.ch11
Copyright © 2009 John Wiley & Sons, Ltd
Book Title
Prediction of Protein Structures, Functions, and Interactions
Additional Information
How to Cite
Tress, M., Bujnicki, J. M., Lopez, G. and Valencia, A. (2008) Integrating Prediction of Structure, Function, and Interactions, in Prediction of Protein Structures, Functions, and Interactions (ed J. M. Bujnicki), John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/9780470741894.ch11
Editor Information
- 2
Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, ul. Ks. Trojdena 4, 02-109 Warsaw, Poland
- 3
Laboratory of Bioinformatics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, ul. Umultowska 89, 61-614 Poznan, Poland
Publication History
- Published Online: 18 DEC 2008
- Published Print: 19 DEC 2008
ISBN Information
Print ISBN: 9780470517673
Online ISBN: 9780470741894
- Summary
- Chapter
Keywords:
- structure, function, and interactions - integrating prediction;
- Gene Ontology (GO) and GO consortium;
- protein function homology-based prediction;
- protein function annotation and homology;
- 3D structures and predicting function;
- large-scale experimental methods and function prediction;
- yeast two-hybrid and tandem affinity-purification/mass spectroscopy;
- CASP and function prediction assessment
Summary
This chapter contains sections titled:
Introduction: A Flood of Sequence Data and the Limits of Homology-Based Function Prediction
Predicting Function with 1D Sequence Features
Predicting Function with 3D Structures
Predicting Function from Whole Genome Information
Function Prediction from Large-Scale Experimental Methods and Networks
Information from Text Mining
Recent Development and Future Directions
Assessment of Function Prediction
Acknowledgements
References