Chapter 9. The Prediction of Macromolecular Complexes by Docking
- Janusz M. Bujnicki2,3
Published Online: 18 DEC 2008
DOI: 10.1002/9780470741894.ch9
Copyright © 2009 John Wiley & Sons, Ltd
Book Title
Prediction of Protein Structures, Functions, and Interactions
Additional Information
How to Cite
de Vries, S. J., van Dijk, M. and Bonvin, A. M. J. J. (2008) The Prediction of Macromolecular Complexes by Docking, in Prediction of Protein Structures, Functions, and Interactions (ed J. M. Bujnicki), John Wiley & Sons, Ltd, Chichester, UK. doi: 10.1002/9780470741894.ch9
Editor Information
- 2
Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, ul. Ks. Trojdena 4, 02-109 Warsaw, Poland
- 3
Laboratory of Bioinformatics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, ul. Umultowska 89, 61-614 Poznan, Poland
Publication History
- Published Online: 18 DEC 2008
- Published Print: 19 DEC 2008
ISBN Information
Print ISBN: 9780470517673
Online ISBN: 9780470741894
- Summary
- Chapter
Keywords:
- macromolecular complexes and prediction and docking;
- CAPRI (Critical Assessment of Predicted Interactions);
- docking program HADDOCK;
- mean-field approach and multiple loop conformations;
- protein-DNA docking data use;
- docking server performance;
- macromolecular docking flowchart;
- docking models and experiment outcome prediction
Summary
This chapter contains sections titled:
Introduction
Flexibility
The Use of Data in Docking
State-of-the-art Methodology in Macromolecular Docking
Performance of Docking Servers
Practical Aspects of Docking
The Interpretation of Docking Results
Acknowledgments
List of Abbreviations
References