Chapter 5. Phylogenetic Analysis

  1. Øyvind Hammer and
  2. David A.T. Harper

Published Online: 30 NOV 2007

DOI: 10.1002/9780470750711.ch5

Paleontological Data Analysis

Paleontological Data Analysis

How to Cite

Hammer, Ø. and Harper, D. A.T. (eds) (2005) Phylogenetic Analysis, in Paleontological Data Analysis, Blackwell Publishing, Malden, MA, USA. doi: 10.1002/9780470750711.ch5

Publication History

  1. Published Online: 30 NOV 2007
  2. Published Print: 1 NOV 2005

ISBN Information

Print ISBN: 9781405115445

Online ISBN: 9780470750711

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Keywords:

  • phylogenetic analysis;
  • parsimony analysis;
  • character state reconstruction;
  • consistency index;
  • bootstrapping

Summary

This chapter contains section titled:

  • Introduction

  • Characters

  • Parsimony analysis

  • Character state reconstruction

  • Evaluation of characters and trees

  • Consensus tree

  • Consistency index

  • Retention index

  • Bootstrapping

  • Bremer support

  • Stratigraphic congruency indices

  • Phylogenetic analysis with maximum likelihood