6. Shedding Light on Transmembrane Topology

  1. Huzefa Rangwala2 and
  2. George Karypis3
  1. Gábor E. Tusnády and
  2. István Simon

Published Online: 7 SEP 2010

DOI: 10.1002/9780470882207.ch6

Introduction to Protein Structure Prediction: Methods and Algorithms

Introduction to Protein Structure Prediction: Methods and Algorithms

How to Cite

Tusnády, G. E. and Simon, I. (2010) Shedding Light on Transmembrane Topology, in Introduction to Protein Structure Prediction: Methods and Algorithms (eds H. Rangwala and G. Karypis), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470882207.ch6

Editor Information

  1. 2

    Department of Computer Science, George Mason University, Fairfax, VA 22030, USA

  2. 3

    Department of Computer Science, University of Minnesota Minneapolis, MN 55455, USA

Author Information

  1. lntsitute of Enzymology, BRC, Hungarian Academy of Sciences, Budapest, Hungary

Publication History

  1. Published Online: 7 SEP 2010
  2. Published Print: 12 NOV 2010

Book Series:

  1. Wiley Series on Bioinformatics: Computational Techniques and Engineering

Book Series Editors:

  1. Yi Pan and
  2. Albert Zomaya

ISBN Information

Print ISBN: 9780470470596

Online ISBN: 9780470882207

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Keywords:

  • shedding light on transmembrane topology and transmembrane proteins (TMPs) - critical role in living cells;
  • genome-wide identification and characterization of TMPs - requiring fast, efficient and accurate prediction methods;
  • databases and benchmark sets - resources on Internet and benchmark sets, used by prediction methods

Summary

This chapter contains sections titled:

  • Introduction

  • Structure of Integral Membrane Proteins

  • Topology Prediction of Membrane Proteins

  • Databases and Benchmark Sets

  • Conclusions

  • References