22. Protein Function Prediction with Data-Mining Techniques

  1. Mourad Elloumi3 and
  2. Albert Y. Zomaya4
  1. Xing-Ming Zhao1 and
  2. Luonan Chen2

Published Online: 23 DEC 2010

DOI: 10.1002/9780470892107.ch22

Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications

Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications

How to Cite

Zhao, X.-M. and Chen, L. (2011) Protein Function Prediction with Data-Mining Techniques, in Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications (eds M. Elloumi and A. Y. Zomaya), John Wiley & Sons, Inc., Hoboken, NJ, USA. doi: 10.1002/9780470892107.ch22

Editor Information

  1. 3

    Unit of Technologies of Information and Communication (UTIC) and University of Tunis-El Manar, Tunisia

  2. 4

    School of Information Technologies, The University of Sydney, Australia

Author Information

  1. 1

    Institute of Systems Biology, Shanghai University, China

  2. 2

    Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China

Publication History

  1. Published Online: 23 DEC 2010
  2. Published Print: 18 JAN 2011

ISBN Information

Print ISBN: 9780470505199

Online ISBN: 9780470892107

SEARCH

Keywords:

  • protein function prediction with data-mining techniques - challenging problems in postgenomic era, annotating uncharacterized proteins with biological functions;
  • protein annotation based on protein structure - protein sequence, predicting functions of unknown protein;
  • protein function prediction, and data integration - different biological data type integration for protein function prediction, trends in prediction accuracy improvement

Summary

This chapter contains sections titled:

  • Introduction

  • Protein Annotation Based on Sequence

  • Protein Annotation Based on Protein Structure

  • Protein Function Prediction Based on Gene-Expression Data

  • Protein Function Prediction Based on Protein Interactome Map

  • Protein Function Prediction Based on Data Integration

  • Conclusions and Perspectives

  • References