3. Prokaryotic Systems Biology

  1. Gloria M. Coruzzi2 and
  2. Rodrigo A. Gutiérrez2,3
  1. Thadeous Kacmarczyk2,
  2. Peter Waltman1 and
  3. Richard Bonneau1,2

Published Online: 14 AUG 2009

DOI: 10.1002/9781444312249.ch3

Annual Plant Reviews Volume 35: Plant Systems Biology

Annual Plant Reviews Volume 35: Plant Systems Biology

How to Cite

Kacmarczyk, T., Waltman, P. and Bonneau, R. (2009) Prokaryotic Systems Biology, in Annual Plant Reviews Volume 35: Plant Systems Biology (eds G. M. Coruzzi and R. A. Gutiérrez), Wiley-Blackwell, Oxford, UK. doi: 10.1002/9781444312249.ch3

Editor Information

  1. 2

    Department of Biology and Center for Genomics and Systems Biology, New York University, New York, NY, USA

  2. 3

    Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Santiago, Chile

Author Information

  1. 1

    Computer Science Department, Courant Institute for Mathematical Sciences, New York University, New York, NY, USA

  2. 2

    Department of Biology and Center for Genomics and Systems Biology, New York University, New York, NY, USA

Publication History

  1. Published Online: 14 AUG 2009
  2. Published Print: 24 APR 2009

ISBN Information

Print ISBN: 9781405162838

Online ISBN: 9781444312249

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Keywords:

  • systems biology;
  • network inference;
  • Halobacterium NRC-1;
  • Halobacterium salinarum;
  • Bacillus subtilis;
  • Caulobacter crescentus;
  • Escherichia coli;
  • microarray;
  • proteomics

Summary

This chapter contains sections titled:

  • Introduction

  • Types of questions

  • A typical prokaryotic systems biology project

  • Global models

  • Comparative functional genomics of prokaryotes

  • Review of core technologies for prokaryotic systems biology

  • Caulobacter crescentus

  • Bacillus subtilis

  • Escherichia coli

  • Halobacterium salinarium NRC-1

  • Conclusion

  • References