Chapter 16. Docking and Scoring for Structure-based Drug Design

  1. Prof. Dr. Thomas Lengauer
  1. Matthias Rarey,
  2. Jörg Degen,
  3. Ingo Reulecke

Published Online: 5 FEB 2008

DOI: 10.1002/9783527619368.ch16

Bioinformatics - From Genomes to Therapies

Bioinformatics - From Genomes to Therapies

How to Cite

Rarey, M., Degen, J. and Reulecke, I. (2008) Docking and Scoring for Structure-based Drug Design, in Bioinformatics - From Genomes to Therapies (ed T. Lengauer), Wiley-VCH Verlag GmbH, Weinheim, Germany. doi: 10.1002/9783527619368.ch16

Editor Information

  1. Max-Planck-Institute for Informatics, Stuhlsatzenhausweg 85, 66123 Saarbrücken, Germany

Publication History

  1. Published Online: 5 FEB 2008
  2. Published Print: 11 JAN 2007

ISBN Information

Print ISBN: 9783527312788

Online ISBN: 9783527619368

SEARCH

Keywords:

  • docking;
  • elucidation;
  • resonance;
  • protonation;
  • toxicity

Summary

This chapter contains sections titled:

  • Introduction

  • Scoring Protein-Ligand Complexes

  • Methods for Protein-Ligand Docking

  • Structure-based Virtual Screening

  • From Molecules to Fragment Spaces: Structure-based De Novo Design

  • Structure-based Drug Design at Work: Validation Studies and Applications

  • Concluding Remarks

  • References