Chapter 31. Analyzing Protein Interaction Networks

  1. Prof. Dr. Thomas Lengauer
  1. Johannes Goll,
  2. Peter Uetz

Published Online: 5 FEB 2008

DOI: 10.1002/9783527619368.ch31

Bioinformatics - From Genomes to Therapies

Bioinformatics - From Genomes to Therapies

How to Cite

Goll, J. and Uetz, P. (2008) Analyzing Protein Interaction Networks, in Bioinformatics - From Genomes to Therapies (ed T. Lengauer), Wiley-VCH Verlag GmbH, Weinheim, Germany. doi: 10.1002/9783527619368.ch31

Editor Information

  1. Max-Planck-Institute for Informatics, Stuhlsatzenhausweg 85, 66123 Saarbrücken, Germany

Publication History

  1. Published Online: 5 FEB 2008
  2. Published Print: 11 JAN 2007

ISBN Information

Print ISBN: 9783527312788

Online ISBN: 9783527619368

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Keywords:

  • reproducible;
  • copurification;
  • stable complexes;
  • paralogous;
  • colocalization data

Summary

This chapter contains sections titled:

  • Introduction

  • Experimental Methods and Interaction Data

  • Validation of Experimental Protein-Protein Interaction Data

  • Predicting Protein-Protein Interactions

  • Representing Protein-Protein Interactions as Graphs

  • Integrating Multiple Protein-Protein Interaction Evidence

  • Predicting Protein Functions from Protein Networks

  • Evolution of Protein-Protein Interactions

  • Databases and Other Information Sources

  • Analysis and Visualization Tools

  • Outlook/Perspectives

  • References