Chapter 18. Structural, Functional, and Comparative Annotation of Plant Genomes

  1. Prof. Dr. Günter Kahl4,5,
  2. Prof. Dr. Khalid Meksem6
  1. Françoise Thibaud-Nissen1,
  2. Jennifer Wortman2,
  3. C. Robin Buell3,
  4. Wei Zhu1

Published Online: 11 JUN 2008

DOI: 10.1002/9783527622542.ch18

Book Title

The Handbook of Plant Functional Genomics: Concepts and Protocols

The Handbook of Plant Functional Genomics: Concepts and Protocols

Additional Information

How to Cite

Thibaud-Nissen, F., Wortman, J., Buell, C. R. and Zhu, W. (2008) Structural, Functional, and Comparative Annotation of Plant Genomes, in The Handbook of Plant Functional Genomics: Concepts and Protocols (eds G. Kahl and K. Meksem), Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany. doi: 10.1002/9783527622542.ch18

Editor Information

  1. 4

    Mohrmühlgasse 3, 63500 Seligenstadt, Germany

  2. 5

    GenXPro GmbH, Frankfurt Innovation Center Biotechnology (FIZ), Altenhöferallee 3, 60438 Frankfurt am Main, Germany

  3. 6

    Department of Plant, Soil and Agricultural Systems, Southern Illinois University, Carbondale, IL 62901-4415, USA

Author Information

  1. 1

    The J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA

  2. 2

    The Institute for Genomic Research (TIGR), Informatics Department, 9712 Medical Center Drive, Rockville, MD 20850, USA

  3. 3

    The Institute for Genomic Research (TIGR), Plant Genomics Group, 9712 Medical Center Drive, Rockville, MD 20850, USA

Publication History

  1. Published Online: 11 JUN 2008
  2. Published Print: 10 JUN 2008

ISBN Information

Print ISBN: 9783527318858

Online ISBN: 9783527622542

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CHAPTER TOOLS

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Keywords:

  • genome annotation;
  • comparative genomics;
  • gene prediction;
  • Cognate transcript sequence;
  • sequence alignment;
  • ab initio gene finder

Summary

This chapter contains sections titled:

  • Introduction

  • Methods, Protocols, and Applications

  • Perspectives

  • References

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