SEARCH

SEARCH BY CITATION

REFERENCES

  • 1
    Guttmacher AE, Collins FS. Genomic medicine—a primer. N Engl J Med 2002;347:151220.
  • 2
    Weinblatt ME, Kremer JM, Bankhurst AD, Bulpitt KJ, Fleischmann RM, Fox RI, et al. A trial of etanercept, a recombinant tumor necrosis factor receptor:Fc fusion protein, in patients with rheumatoid arthritis receiving methotrexate. N Engl J Med 1999;340:2539.
  • 3
    Bathon JM, Martin RW, Fleischmann RM, Tesser JR, Schiff MH, Keystone EC, et al. A comparison of etanercept and methotrexate in patients with early rheumatoid arthritis. N Engl J Med 2000;343:158693.
  • 4
    Mansour JC, Schwarz RE. Molecular mechanisms for individualized cancer care. J Am Coll Surg 2008;207:2508.
  • 5
    Van 't Veer LJ, Bernards R. Enabling personalized cancer medicine through analysis of gene-expression patterns. Nature 2008;452:56470.
  • 6
    Lawrence RC, Helmick CG, Arnett FC, Deyo RA, Felson DT, Giannini EH, et al. Estimates of the prevalence of arthritis and selected musculoskeletal disorders in the United States. Arthritis Rheum 1998;41:77899.
  • 7
    Manners PJ, Bower C. Worldwide prevalence of juvenile arthritis: why does it vary so much?J Rheumatol 2002;29:152030.
  • 8
    Sacks JJ, Helmick CG, Luo YH, Ilowite NT, Bowyer S. Prevalence of and annual ambulatory health care visits for pediatric arthritis and other rheumatologic conditions in the United States in 2001–2004. Arthritis Rheum 2007;57:143945.
  • 9
    Wallace CA, Sherry DD. Preliminary report of higher dose methotrexate treatment in juvenile rheumatoid arthritis. J Rheumatol 1992;19:16047.
  • 10
    Reiff A, Shaham B, Wood BP, Bernstein BH, Stanley P, Szer IS. High dose methotrexate in the treatment of refractory juvenile rheumatoid arthritis. Clin Exp Rheumatol 1995;13:1138.
  • 11
    Lovell DJ, Giannini EH, Reiff A, Cawkwell GD, Silverman ED, Nocton JJ, et al, for the Pediatric Rheumatology Collaborative Study Group.Etanercept in children with polyarticular juvenile rheumatoid arthritis. N Engl J Med 2000;342:7639.
  • 12
    Wallace CA, Giannini EH, Spalding SJ, Hashkes PJ, O'Neil KM, Zeft AS, et al. Trial of early aggressive therapy in polyarticular juvenile idiopathic arthritis. Arthritis Rheum 2012;64:201221.
  • 13
    Petty RE, Southwood TR, Manners P, Baum J, Glass DN, Goldenberg J, et al. International League of Associations for Rheumatology classification of juvenile idiopathic arthritis: second revision, Edmonton, 2001. J Rheumatol 2004;31:3902.
  • 14
    Cobb JP, Mindrinos MN, Miller-Graziano C, Calvano SE, Baker HV, Xiao W, et al. Application of genome-wide expression analysis to human health and disease. Proc Natl Acad Sci U S A 2005;102:48016.
  • 15
    Meyer D, Dimitriadou E, Hornik L, Weingessel A, Leisch F, Chang CC, et al. Package e1071: Misc functions of the department of statistics (e1071), TU Wien. R package version 1.6-1. URL: http://cran.r-project.org/web/packages/e1071/index.html.
  • 16
    Chang CC, Lin CJ. LIBSVM: a library for support vector machines. ACM Trans Intell Syst Technol 2011;2:27.127.
  • 17
    Du P, Kibbe WA, Lin SM. Lumi: a pipeline for processing Illumina microarray. Bioinformatics 2008;24:15478.
  • 18
    Lin SM, Du P, Huber W, Kibbe WA. Model-based variance-stabilizing transformation for Illumina microarray data. Nucleic Acids Res 2008;36:e11.
  • 19
    Johnson WE, Li C, Rabinovic A. Adjusting batch effects in microarray expression data using empirical Bayes methods. Biostatistics 2007;8:11827.
  • 20
    Smyth GK. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004;3:article 3.
  • 21
    Smyth GK. Limma: linear models for microarray data. In: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, editors.Bioinformatics and computational biology solutions using R and Bioconductor.New York:Springer;2005. p.397420.
  • 22
    Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser B 1995;57:289300.
  • 23
    Iliopoulos D, Hirsch HA, Struhl K. An epigenetic switch involving NF-κB, Lin28, Let-7 microRNA, and IL6 links inflammation to cell transformation. Cell 2009;139:693706.
  • 24
    Hirsch HA, Iliopoulos D, Joshi A, Zhang Y, Jaeger SA, Bulyk M, et al. A transcriptional signature and common gene networks link cancer with lipid metabolism and diverse human diseases. Cancer Cell 2010;17:34861.
  • 25
    Lefevre S, Knedla A, Tennie C, Kampmann A, Wunrau C, Dinser R, et al. Synovial fibroblasts spread rheumatoid arthritis to unaffected joints. Nat Med 2009;15:141420.
  • 26
    Jarvis JN, Frank M. Functional genomics and rheumatoid arthritis: where have we been and where should we go [review]?Genome Med 2010;2:44.
  • 27
    Moore TL, Osborn TG, Dorner RW. 19S IgM rheumatoid factor-7S IgG rheumatoid factor immune complexes isolated in sera of patients with juvenile rheumatoid arthritis. Pediatric Res 1986;20:97781.
  • 28
    Jarvis JN, Pousak T, Krenz M. Detection of IgM rheumatoid factors by enzyme-linked immunosorbent assay in children with juvenile rheumatoid arthritis: correlation with articular disease and laboratory abnormalities. Pediatrics 1992;90:9549.