Literature Cited

  • 1
    Verchot-Lubicz J, Goldstein RE. Cytoplasmic streaming enables the distribution of molecules and vesicles in large plant cells. Protoplasma 2010;240:99107.
  • 2
    Hamada T, Tominaga M, Fukaya T, Nakamura M, Nakano A, Watanabe Y, Hashimoto T, Baskin TI. RNA processing bodies, peroxisomes, Golgi bodies, mitochondria, and endoplasmic reticulum tubule junctions frequently pause at cortical microtubules. Plant Cell Physiol 2012;53:699708.
  • 3
    Nebenführ A, Gallagher LA, Dunahay TG, Frohlick JA, Mazurkiewicz AM, Meehl JB, Staehelin LA. Stop-and-go movements of plant Golgi stacks are mediated by the acto-myosin system. Plant Physiol 1999;121:11271141.
  • 4
    Akkerman M, Overdijk EJR, Schel JHN, Emons AMC, Ketelaar T. Golgi body motility in the plant cell cortex correlates with actin cytoskeleton organization. Plant Cell Physiol 2011;52:18441855.
  • 5
    Fang C, Bourdette D, Banker G. Oxidative stress inhibits axonal transport: Implications for neurodegenerative diseases. Mol Neurodegener 2012;7:29.
  • 6
    Shimmen T, Yokota E. Cytoplasmic streaming in plants. Curr Opin Cell Biol 2004;16:6872.
  • 7
    Ueda H, Yokota E, Kutsuna N, Shimada T, Tamura K, Shimmen T, Hasezawa S, Dolja VV, Hara-Nishimura I. Myosin-dependent endoplasmic reticulum motility and F-actin organization in plant cells. Proc Natl Acad Sci U S A 2010;107:68946899.
  • 8
    Hirokawa N, Noda Y, Tanaka Y, Niwa S. Kinesin superfamily motor proteins and intracellular transport. Nat Rev Mol Cell Biol 2009;10:682696.
  • 9
    Atmodjo MA, Sakuragi Y, Zhu X, Burrell AJ, Mohanty SS, Atwood JA, Orlando R, Scheller HV, Mohnen D. Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan: Galacturonosyltransferase complex. Proc Natl Acad Sci U S A 2011;108:2022520230.
  • 10
    de Graffenried CL, Bertozzi CR. The roles of enzyme localisation and complex formation in glycan assembly within the Golgi apparatus. Curr Opin Cell Biol 2004;16:356363.
  • 11
    Kerppola TK. Design and implementation of bimolecular fluorescence complementation (BiFC) assays for the visualization of protein interactions in living cells. Nat Protoc 2006;1:12781286.
  • 12
    Zhou J, Lin JA, Zhou CH, Deng XY, Xia B. An improved bimolecular fluorescence complementation tool based on superfolder green fluorescent protein. Acta Biochimica et Biophysica Sinica 2011;43:239244.
  • 13
    Förster T. Energiewanderung und Fluoreszenz. Naturwissenschaften 1946;6:166175.
  • 14
    Miyawaki A. Development of probes for cellular functions using fluorescent proteins and fluorescence resonance energy transfer. Annu Rev Biochem 2011;80:357373.
  • 15
    Vogel SS, Thaler C, Koushik SV.Fanciful FRET. Sci STKE 2006;2006:re2.
  • 16
    Vereb G, Matko J, Szollosi J. Cytometry of fluorescence resonance energy transfer. Methods Cell Biol 2004;75:105152.
  • 17
    Takanishi CL, Bykova EA, Cheng W, Zheng J. GFP-based FRET analysis in live cells. Brain Res 2006;1091:1329.
  • 18
    Roszik J, Szollosi J, Vereb G. AccPbFRET: An ImageJ plugin for semi-automatic, fully corrected analysis of acceptor photobleaching FRET images. BMC Bioinformatics 2008;9:346.
  • 19
    Roszik J, Lisboa D, Szollosi J, Vereb G. Evaluation of intensity-based ratiometric FRET in image cytometry—Approaches and a software solution. Cytometry Part A 2009;75A:761767.
  • 20
    Trinel D, Leray A, Spriet C, Usson Y, Heliot L. Upgrading time domain FLIM using an adaptive Monte Carlo data inflation algorithm. Cytometry Part A 2011;79A:528537.
  • 21
    Karpova TS, Baumann CT, He L, Wu X, Grammer A, Lipsky P, Hager GL, McNally JG. Fluorescence resonance energy transfer from cyan to yellow fluorescent protein detected by acceptor photobleaching using confocal microscopy and a single laser. J Microsc Oxford 2003;209:5670.
  • 22
    Harholt J, Jensen J, Verhertbruggen Y, Sogaard C, Bernard S, Nafisi M, Poulsen C, Geshi N, Sakuragi Y, Driouich A et al. ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta. Planta 2012:236:115128.
  • 23
    Neumann M, Gabel D. Simple method for reduction of autofluorescence in fluorescence microscopy. J Histochem Cytochem 2002;50:437439.
  • 24
    Ganguly S, Clayton AHA, Chattopadhyay A. Fixation alters fluorescence lifetime and anisotropy of cells expressing EYFP-tagged serotonin(1A) receptor. Biochem Biophys Res Commun 2011;405:234237.
  • 25
    Cooper JA. Effects of cytochalasin and phalloidin on actin. J Cell Biol 1987;105:14731478.
  • 26
    Osterrieder A, Carvalho CM, Latijnhouwers M, Johansen JN, Stubbs C, Botchway S, Hawes C. Fluorescence lifetime imaging of interactions between Golgi tethering factors and small GTPases in plants. Traffic 2009;10:10341046.
  • 27
    Kim J, Li X, Kang MS, Im KB, Genovesio A, Grailhe R. Quantification of protein interaction in living cells by two-photon spectral imaging with fluorescent protein fluorescence resonance energy transfer pair devoid of acceptor bleed-through. Cytometry Part A 2012;81A:112119.
  • 28
    Earley KW, Haag JR, Pontes O, Opper K, Juehne T, Song KM, Pikaard CS. Gateway-compatible vectors for plant functional genomics and proteomics. Plant J 2006;45:616629.
  • 29
    Rual JF, Hirozane-Kishikawa T, Hao T, Bertin N, Li SM, Dricot A, Li N, Rosenberg J, Lamesch P, Vidalain PO et al. Human ORFeome version 1.1: A platform for reverse proteomics. Genome Res 2004;14:21282135.
  • 30
    Schoberer J, Strasser R. Sub-compartmental organization of Golgi-resident N-glycan processing enzymes in plants. Mol Plant 2011;4:220228.
  • 31
    Schoberer J, Vavra U, Stadlmann J, Hawes C, Mach L, Steinkellner H, Strasser R. Arginine/Lysine residues in the cytoplasmic tail promote ER export of plant glycosylation enzymes. Traffic 2009;10:101115.
  • 32
    Boevink P, Oparka K, Cruz SS, Martin B, Betteridge A, Hawes C. Stacks on tracks: The plant Golgi apparatus traffics on an actin/ER network. Plant J 1998;15:441447.
  • 33
    Heinlein M, Padgett HS, Gens JS, Pickard BG, Casper SJ, Epel BL, Beachy RN. Changing patterns of localization of the tobacco mosaic virus movement protein and replicase to the endoplasmic reticulum and microtubules during infection. Plant Cell 1998;10:11071120.
  • 34
    Prokhnevsky AI, Peremyslov VV, Dolja VV. Actin cytoskeleton is involved in targeting of a viral Hsp70 homolog to the cell periphery. J Virol 2005;79:1442114428.
  • 35
    Sieben C, Mikosch M, Brandizzi F, Homann U. Interaction of the K+-channel KAT1 with the coat protein complex II coat component Sec24 depends on a di-acidic endoplasmic reticulum export motif. Plant Journal 2008;56:9971006.
  • 36
    Rasband WS.ImageJ,U. S. National Institutes of Health,Bethesda, Maryland, USA, 1997–2012. Available at:
  • 37
    Sparkes IA, Runions J, Kearns A, Hawes C. Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nat Protoc 2006;1:20192025.
  • 38
    Wallrabe H, Elangovan M, Burchard A, Periasamy A, Barroso M. Confocal FRET microscopy to measure clustering of ligand–receptor complexes in endocytic membranes. Biophys J 2003;85:559571.
  • 39
    Straight AF. Fluorescent protein applications in microscopy. Methods Cell Biol 2007;81:93113.
  • 40
    Billinton N, Knight AW. Seeing the wood through the trees: A review of techniques for distinguishing green fluorescent protein from endogenous autofluorescence. Anal Biochem 2001;291:175197.
  • 41
    Treitschke S, Doehlemann G, Schuster M, Steinberg G. The myosin motor domain of fungal chitin synthase V is dispensable for vesicle motility but required for virulence of the maize pathogen Ustilago maydis. Plant Cell 2010;22:24762494.
  • 42
    Malkani N, Schmid JA. Some secrets of fluorescent proteins: Distinct bleaching in various mounting fluids and photoactivation of cyan fluorescent proteins at YFP-excitation. Plos One 2011;6:e18586.
  • 43
    Valentin G, Verheggen C, Piolot T, Neel H, Coppey-Moisan M, Bertrand E. Photoconversion of YFP into a CFP-like species during acceptor photobleaching FRET experiments. Nat Methods 2005;2:801.
  • 44
    Hink MA, Bisseling T, Visser AJWG. Imaging protein–protein interactions in living cells. Plant Mol Biol 2002;50:871883.
  • 45
    Serbus LR, Cha BJ, Theurkauf WE, Saxton WM. Dynein and the actin cytoskeleton control kinesin-driven cytoplasmic streaming in Drosophila oocytes. Development 2005;132:37433752.
  • 46
    Yamamoto M, Suzuki SO, Himeno M. The effects of dynein inhibition on the autophagic pathway in glioma cells. Neuropathology 2010;30:16.