Cenozoic climate change and diversification on the continental shelf and slope: evolution of gastropod diversity in the family Solariellidae (Trochoidea)
Article first published online: 4 MAR 2013
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Ecology and Evolution
Volume 3, Issue 4, pages 887–917, April 2013
How to Cite
Ecology and Evolution 2013; 3(4): 887–917
- Issue published online: 11 APR 2013
- Article first published online: 4 MAR 2013
- Manuscript Accepted: 1 FEB 2013
- Manuscript Revised: 30 JAN 2013
- Manuscript Received: 12 DEC 2012
- Deutsche Forschungsgemeinschaft
- JSPS KAKENHI. Grant Number: 23370040
- European Distributed Institute of Taxonomy
- Collaborative Scheme for Systematics Research
- Systematics Association
|ece3513-sup-0001-FigureS1.pdf||application/PDF||496K||Figure S1. Results of GMYC test on an ultrametric tree produced using BEAST for the cytochrome oxidase I sequences. (A) Tree with ESUs and species names marked on the right-hand side. Support for nodes are posterior probabilities, shown only for species-level relationships and PP > 50%. Branches in red indicate population structure. (B) Maximum likelihood plot showing peak congruent with threshold limit in B. (C) Lineage through time plot with red line showing the threshold level suggested by GMYC.|
|ece3513-sup-0002-FigureS2.pdf||application/PDF||440K||Figure S2. Results of GMYC test on an ultrametric tree produced using BEAST for concatenated sequences from all three mitochondrial genes. (A) Tree with ESUs and species names marked on the right-hand side. Support for nodes are posterior probabilities, shown only for species-level relationships and PP>50%. Branches in red indicate population structure. (B) Maximum likelihood plot showing peak congruent with threshold limit in B. (C) Lineage through time plot with red line showing the threshold level suggested by GMYC.|
|ece3513-sup-0003-FigureS3.pdf||application/PDF||346K||Figure S3. Combined gene tree based on Bayesian inference using MrBayes for Solariellidae using four genes (28S, 16S, 12S and COI), showing only relationship among outgroups and Solariellidae (solariellid clade is collapsed). Support values are posterior probabilities (PP); branches with PP < 50% were collapsed, PP not shown for intraspecific relationships. See Table S1 for outgroup sampling details. Families and relationships are consistent with those discussed in Williams (2012).|
|ece3513-sup-0004-TableS1.docx||Word document||106K||Table S1. Outgroup specimens used in study, ordered by family, along with details of sampling localities, registration numbers of voucher specimens, and EMBL accession numbers for sequences. MNHN, Muséum National d'Histoire Naturelle, Paris; NHMUK, Natural History Museum, London; and NSMT, National Museum of Nature and Science, Tokyo, Japan (NSMT). Photos of specimens are in Williams (2012) or available on MorphoBank online at http://www.morphobank.org/index.php/Projects/ProjectOverview/project_id/223.|
|ece3513-sup-0005-TableS2.doc||Word document||44K||Table S2. Forward (F) and reverse (R) PCR primers (also used in sequencing), and forward (FS) and reverse (RS) internal sequencing primers. Annealing temperatures and concentration of magnesium chloride (MgCl2) used in 50 μL polymerase chain reactions.|
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