Functional similarity and molecular divergence of a novel reproductive transcriptome in two male-pregnant Syngnathus pipefish species
Article first published online: 20 SEP 2013
© 2013 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
Ecology and Evolution
Volume 3, Issue 12, pages 4092–4108, October 2013
Total views since publication: 61
How to Cite
Ecology and Evolution 2013; 3(12): 4092–4108
- Issue published online: 23 OCT 2013
- Article first published online: 20 SEP 2013
- Manuscript Accepted: 12 AUG 2013
- Manuscript Revised: 6 AUG 2013
- Manuscript Received: 2 JUL 2013
- National Science Foundation
- American Museum of Natural History Lerner-Gray
- Sigma Xi
- Michigan State University
|ece3763-sup-0001-FigureS1.pdf||application/PDF||70K||Figures S1 and S2 corresponding to S. scovelli and S. floridae, respectively, are MA-plots from DEG-seq differential expression analyses. M (y-axis values) = log2CPregnant – log2CNonpregnant, where Ci represents the number of uniquely mapped reads from library i. A (x-axis values) = (log2CPregnant + log2CNonpregnant)/2. Genes (contigs) for which the DEG-seq P-value < 0.05 are represented by red dots on the MA-plots.|
|ece3763-sup-0003-TableS1.csv||CSV document||672K||Table S1 contains 6 columns, which correspond to S. scovelli contig name, contig length, number of uniquely mapped reads from the pregnant library, number of uniquely mapped reads from the nonpregnant library, the normalized pregnant/nonpregnant fold change, and the DEG-seq “MARS” P-value for differential expression.|
|ece3763-sup-0004-TableS2.csv||CSV document||383K||Table S2 contains the same information, but for S. floridae.|
|ece3763-sup-0005-TableS3.csv||CSV document||23K||Table S3 contains this information, including top blastx hit descriptions, for the 150 orthologous pairs that belong to pregnancy-enriched, pregnancy-depressed, and evenly expressed categories.|
Please note: Wiley-Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.