Guidelines for a priori grouping of species in hierarchical community models
Article first published online: 22 FEB 2014
© 2014 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
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Ecology and Evolution
Volume 4, Issue 7, pages 877–888, April 2014
How to Cite
Ecology and Evolution 2014; 4(7):877–888
- Issue published online: 7 APR 2014
- Article first published online: 22 FEB 2014
- Manuscript Accepted: 7 JAN 2014
- Manuscript Received: 19 DEC 2013
- North Carolina Cooperative Fish and Wildlife Research Unit and Department of Applied Ecology at North Carolina State University
|ece3976-sup-0001-FigS1.tiff||TIFF image||24K||Figure S1. Total number of detections by species for the Puerto Rico and Hudson River Valley data sets.|
|ece3976-sup-0002-FigS2.tiff||TIFF image||45K||Figure S2. Posterior mean estimates of species richness with 95% posterior credible intervals for the full community model and each of the three different classification approaches for the Puerto Rico (top) and Hudson River Valley (bottom) data sets at each site.|
|ece3976-sup-0003-FigS3.tiff||TIFF image||37K||Figure S3. Individual species occurrence probabilities (posterior means with 95% credible intervals) in the four different habitat types (Agriculture, Forest, Urban, and Edge) of the study area in southwestern Puerto Rico for four important species (ANMA, Antillean mango, Anthracothorax dominicus; PRVI, Puerto Rican vireo, Vireo latimeri; PRSP, Puerto Rican spindalis, Spindalis portoricensis; and PUEB, Puerto Rican bullfinch, Loxigilla portoricensis).|
|ece3976-sup-0004-FigS4.tiff||TIFF image||22K||Figure S4. Mean marginal occurrence probabilities for four priority conservation species (VESP, Vesper sparrow, Pooecetes gramineus; CERW, Cerulean warbler, Setophaga cerulean; BTBW, Black-throated blue warbler, Setophaga caerulescens; and SCTA, Scarlet tanager, Piranga olivacea) in relation to forest fragment area in the Hudson River Valley.|
|ece3976-sup-0005-FigS5.tiff||TIFF image||56K||Figure S5. Posterior mean occurrence probabilities for four priority conservation species (Vesper sparrow, VESP: two detections at two sites; Cerulean warbler, CERW: seven detections at six sites; Black-throated blue warbler, BTBW: 20 detections at nine sites; and Scarlet tanager, SCTA: 141 detections at 56 sites) at individual sites in the Hudson River Valley study area.|
Table S1. Individual observed species and their group classifications (PR: H – Habitat, M – Microhabitat, D – Diet; Hudson River Valley: Nest location – N, Habitat – H, D – Diet, see Table 1) for both the Puerto Rico and Hudson River Valley data sets.
Table S2. Model performance for each group classification approach (italics and bold; PR: H – Habitat, M – Microhabitat, D – Diet; Hudson River Valley: Nest location – N, Habitat – H, D – Diet, see Table 1) and subgroup within each group classification approach calculated by computing the area under the curve of the receiver operating characteristic (AUC) for both the Puerto Rico and Hudson River Valley data sets.
|ece3976-sup-0007-SupplementS2.docx||Word document||21K||Data S1. WinBUGS code and convergence assessment.|
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