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Table S1. Sequence and spectral characteristics of the H2Ab-associated peptides eluted from wild type, TAP-/- and ERAAP-/- splenocytes.

Table S2. Nested H2Ab-associated peptides eluted from wild type, TAP-/- and ERAAP-/- splenocytes.

Figure S1. ESI-MS/MS spectra of H2Ab-associated peptides displayed by wild type, TAP-/- and ERAAP-/- splenocytes.

Figure S2. ERAAP- and TAP-deficient MHC class II molecules present longer peptides.

Figure S3. Altered TCR β-chain repertoire of CAP-deficient CD4+ T cells.

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