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Capillary separations enabling tissue proteomics-based biomarker discovery

Tong Guo¹,
Cheng S. Lee¹,
Weijie Wang²,
Don L. DeVoe³,
Brian M. Balgley Dr.^2,*

Article first published online: 15 SEP 2006

DOI: 10.1002/elps.200600094

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ELECTROPHORESIS

Special Issue: Microchannel-Based Methods for Proteomics

Volume 27, Issue 18, pages 3523–3532, No. 18 September 2006

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How to Cite

Guo, T., Lee, C. S., Wang, W., DeVoe, D. L. and Balgley, B. M. (2006), Capillary separations enabling tissue proteomics-based biomarker discovery. ELECTROPHORESIS, 27: 3523–3532. doi: 10.1002/elps.200600094

Author Information

¹
Department of Chemistry and Biochemistry, University of Maryland, College Park, MD, USA
²
Calibrant Biosystems, Gaithersburg, MD, USA
³
Department of Mechanical Engineering and Bioengineering Program, University of Maryland, College Park, MD, USA

Email: Brian M. Balgley Dr. (brian.balgley@calibrant.com)

^*Calibrant Biosystems, 910 Clopper Road, Suite 220N, Gaithersburg, MD 20878, USA Fax: +1-301-4242462

Publication History

Issue published online: 15 SEP 2006
Article first published online: 15 SEP 2006
Manuscript Received: 21 FEB 2006

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References

1
Group, B. D. W., Clin. Pharmacol. Ther. 2001, 69, 89–95.
- CrossRef,
- PubMed
2
Fox, R., Hull, M., Ann. N.Y. Acad. Sci. 1993, 687, 217–223.
Direct Link:
3
Diamandis, E. P., Fritsche, H. A., Lilja, H., Chan, D. W., Schwartz, M. K. (Eds.), Tumor Markers: Physiology, Pathobiology, Technology, and Clinical Applications, AACC Press, Washington, DC 2002, pp. 33–63.
4
Bast, R. C., Radvin, P., Hayes, D. F., Bates, S. et al., J. Clin. Oncol. 2001, 19, 1865–1878.
- PubMed,
- Web of Science® Times Cited: 397
5
Arciero, C., Somiari, S. B., Shriver, C. D., Brzeski, H. et al., Int. J. Biol. Markers 2003, 18, 241–272.
6
Bland, K. I., Copeland, E. M. (Eds.), The Breast: Comprehensive Management of Benign and Malignant Diseases, W. B. Saunders Co., Philadelphia 1998, pp. 499–517.
7
Bland, K. I., Copeland, E. M. (Eds.), The Breast: Comprehensive Management of Benign and Malignant Diseases, W. B. Saunders Co., Philadelphia 1998, pp. 458–498.
8
Cole, K. A., Krizman, D. B., Emmert-Buck, M. R., Nat. Genet. 1999, 21, 38–41.
9
Wittliff, J. L., Kunitake, S. T., Chu, S. S., Travis, J. C., J. Clin. Ligand Assay 2000, 23, 66–73.
- Web of Science® Times Cited: 10
10
Emmert-Buck, M. R., Bonner, R. F., Smith, P. D., Chuaqui, R. F. et al., Science 1996, 274, 998–1001.
11
Bonner, R. F., Emmert-Buck, M. R., Cole, K., Pohida, T. et al., Science 1997, 278, 1481–1483.
12
DeSouza, A. I., McGregor, E., Dunn, M. J., Rose, M. L., Proteomics 2004, 4, 578–586.
Direct Link:
13
Furuta, M., Weil, R. J., Vortmeyer, A. O., Huang, S. et al., Oncogene 2004, 23, 6806–6814.
14
Zhuang, Z., Lee, Y. S., Zeng, W., Furuta, M. et al., Neurology 2004, 62, 2316–2319.
15
Banks, R. E., Dunn, M. J., Forbes, M. A., Stanley, A. et al., Electrophoresis 1999, 20, 689–700.
Direct Link:
16
Ornstein, D. K., Gillespie, J. W., Paweletz, C. P., Duray, P. H. et al., Electrophoresis 2000, 21, 2235–2242.
Direct Link:
17
Craven, R. A., Banks, R. E., Proteomics 2001, 1, 1200–1204.
Direct Link:
- Abstract
- PDF(77K)
18
Craven, R. A., Totty, N., Harnden, P., Selby, P. J., Banks, R. E., Am. J. Pathol. 2002, 160, 815–822.
19
Ahram, M., Flaig, M. J., Gillespie, J. W., Duray, P. H. et al., Proteomics 2003, 3, 413–421.
Direct Link:
20
Somiari, R. I., Sullivan, A., Russell, S., Somiari, S. et al., Proteomics 2003, 3, 1863–1873.
Direct Link:
21
DeSouza, A. I., McGregor, E., Dunn, M. J., Rose, M. L., Proteomics 2004, 4, 578–586.
Direct Link:
22
Somiari, R. I., Somiari, S., Russell, S., Shriver, C. D., J. Chromatogr. B 2005, 815, 215–225.
23
Xu, B. J., Caprioli, R. M., Sanders, M. E., Jensen, R. A., J. Am. Soc. Mass Spectrom. 2002, 13, 1292–1297.
24
Bhattacharya, S. H., Gal, A. A., Murray, K. K., J. Proteome Res. 2003, 2, 95–98.
25
Chaurand, P., Sanders, M. E., Jensen, R. A., Caprioli, R. M., Am. J. Pathol. 2004, 165, 1057–1068.
26
Paweletz, C. P., Trock, B., Pennanen, M., Tsangaris, T. et al., Dis. Markers 2001, 17, 301–307.
27
Petricoin, E. F., Zoon, K. C., Kohn, E. C., Barrett, J. C., Liotta, L. A., Nat. Rev. 2002, 1, 683–695.
28
Wulfkuhle, J. D., Liotta, L. A., Nat. Rev. 2002, 3, 267–275.
29
Cottingham, K., Anal. Chem. 2003, 75, 472A–476A.
30
Krieg, R. C., Gaisa, N. T., Paweletz, C. P., Knuechel, R., Methods Mol. Biol. 2005, 293, 255–267.
- PubMed,
- CAS
31
Melle, C., Ernst, G., Schimmel, B., Bleul, A. et al., J. Proteome Res. 2005, 4, 1799–1804.
32
Gillette, M. A., Mani, D. R., Carr, S. A., J. Proteome Res. 2005, 4, 1143–1154.
33
Wolters, D. A., Washburn, M. P., Yates, J. R. III, Anal. Chem. 2001, 73, 5683–5690.
34
VerBerkmoes, N. C., Bundy, J. L., Hauser, L., Asano, K. G. et al., J. Proteome Res. 2002, 1, 239–252.
35
Peng, J., Elias, J. E., Thoreen, C. C., Licklider, L. J., Gygi, S. P., J. Proteome Res. 2003, 2, 43–50.
36
Washburn, M. P., Ulaszek, R., Deciu, C., Schieltz, D. M., Yates, J. R. III, Anal. Chem. 2002, 74, 1650–1657.
37
Gygi, S. P., Rist, B., Griffin, T. J., Eng, J., Aebersold, R., J. Proteome Res. 2002, 1, 47–54.
38
Li, C., Hong, Y., Tan, Y.-X., Zhou, H. et al., Mol. Cell. Proteomics 2004, 3, 399–409.
39
Zhang, J., Hu, H., Gao, M., Yang, P., Zhang, X., Electrophoresis 2004, 25, 2374–2383.
Direct Link:
40
DeSouza, L., Diehl, G., Rodrigues, M. J., Guo, J. et al., J. Proteome Res. 2005, 4, 377–386.
41
Cagney, G., Park, S., Chung, C., Tong, B. et al., J. Proteome Res. 2005, 4, 1757–1767.
42
Wu, S.-L., Hancock, W. S., Goodrich, G. G., Kunitake, S. T., Proteomics 2003, 3, 1037–1046.
Direct Link:
43
Zang, L., Toy, D. P., Hancock, W. S., Sgroi, D. C., Karger, B. L., J. Proteome Res. 2004, 3, 604–612.
44
Baker, H., Patel, V., Molinolo, A. A., Shillitoe, E. J. et al., Oral Oncol. 2005, 41, 183–199.
45
Hood, B. L., Darfler, M. M., Guiel, T. G., Furusato, B. et al., Mol. Cell. Proteomics 2005, 4, 1741–1753.
46
Chen, J., Balgley, B. M., DeVoe, D. L., Lee, C. S., Anal. Chem. 2003, 75, 3145–3152.
47
Wang, Y., Balgley, B. M., Rudnick, P. A., Evans, E. L. et al., J. Proteome Res. 2005, 4, 36–42.
48
Wang, Y., Rudnick, P. A., Evans, E. L., Zhuang, Z. et al., Anal. Chem. 2005, 77, 6549–6556.
49
Yan, F., Subramanian, B., Nakeff, A., Barder, T. J. et al., Anal. Chem. 2003, 75, 2299–2308.
50
Wang, H., Clouthier, S. G., Galchev, V., Misek, D. E. et al., Mol. Cell. Proteomics 2005, 4, 618–625.
51
Millea, K. M., Krull, I. S., Cohen, S. A., Gebler, J. C., Berger, S. J., J. Proteome Res. 2006, 5, 135–146.
52
Cargile, B. J., Talley, D. L., Stephenson, J. L., Jr., Electrophoresis 2004, 25, 936–945.
Direct Link:
53
Essader, A. S., Cargile, B. J., Bundy, J. L., Stephenson, J. L., Jr., Proteomics 2005, 5, 24–34.
Direct Link:
54
Conti, M., Galassi, M., Bossi, A., Righetti, P. G., J. Chromatogr. A 1997, 757, 237–245.
55
Chevallet, M., Santoni, V., Poinas, A., Rouquie, D. et al., Electrophoresis 1998, 19, 1901–1909.
Direct Link:
56
Pedersen, S. K., Harry, J. L., Sebastian, L., Baker, J. et al., J. Proteome Res. 2003, 2, 303–311.
57
Geer, L. Y., Markey, S. P., Kowalak, J. A., Wagner, L. et al., J. Proteome Res. 2004, 3, 958–964.
58
Elias, J. E., Haas, W., Faherty, B. K., Gygi, S. P., Nat. Methods 2005, 2, 667–675.
59
Rudnick, P. A., Wang, Y., Evans, E. L., Lee, C. S., Balgley, B. M., J. Proteome Res. 2005, 4, 1353–1360.
60
Wang, W., Zhou, H., Lin, H., Roy, S. et al., Anal. Chem. 2003, 75, 4818–4826.
61
Chelius, D., Zhang, T., Wang, G., Shen, R.-F., Anal. Chem. 2003, 75, 6658–6665.
62
Liu, H., Sadygov, R. G., Yates, J. R. III, Anal. Chem. 2004, 76, 4193–4201.
63
Rappsilber, J., Ryder, U., Lamond, A. I., Mann, M., Genome Res. 2002, 12, 1231–1245.
64
Ishihama, Y., Oda, Y., Tabata, T., Sato, T. et al., Mol. Cell. Proteomics 2005, 4, 1265–1272.
65
Shi, S. R., Key, M. E., Kalra, K. L., J. Histochem. Cytochem. 1991, 39, 741–748.
66
Shi, S. R., Cote, R. J., Taylor, C. R., J. Histochem. Cytochem. 1997, 45, 327–344.
67
Shi, S. R., Cote, R. J., Taylor, C. R., J. Histochem. Cytochem. 2001, 49, 931–938.
68
Taylor, C. R., Cote, R. J., Immunomicroscopy. A Diagnostic Tool for the Surgical Pathologist, Elsevier Sanders, Philadelphia 2005.
69
Prieto, D. A., Hood, B. L., Darfler, M. M., Guiel, T. G. et al., BioTechniques 2005, 38, S32–S35.
- CrossRef
70
Shi, S. R., Liu, C., Balgley, B. M., Lee, C. S., Taylor, C. R., J. Histochem. Cytochem. 2006, 54, 739–743.
71
Crockett, D. K., Lin, Z., Vaughn, C. P., Lim, M. S., Elenitoba-Johnson, K. S., Lab. Invest. 2005, 85, 1405–1415.
72
Palmer-Toy, D. E., Krastins, B., Sarracino, D. A., Nadol, J. B., Jr., Merchant, S. N., J. Proteome Res. 2005, 4, 2404–2411.
73
Shi, S. R., Gu, J., Taylor, C. R. (Eds.), Antigen Retrieval Techniques: Immunohistochemistry and Molecular Morphology, Eaton Publishing, Natick 2000, pp. 165–179.
74
Shi, S. R., Gu, J., Taylor, C. R. (Eds.), Antigen Retrieval Techniques: Immunohistochemistry and Molecular Morphology, Eaton Publishing, Natick 2000, pp. 7–13.
75
Shi, S. R., Gu, J., Taylor, C. R. (Eds.), Antigen Retrieval Techniques: Immunohistochemistry and Molecular Morphology, Eaton Publishing, Natick 2000, pp. 275–285.

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