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  1. 1
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  2. 2
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  3. 3
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  4. 4
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  5. 5
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  6. 6
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  7. 7
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  8. 8
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  9. 9
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  10. 10
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  11. 11
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  12. 12
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  13. 13
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  14. 14
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  15. 15
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  16. 16
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  17. 17
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  18. 18
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  19. 19
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  20. 20
    David M Swanson, Deborah Blacker, Taofik AlChawa, Kerstin U Ludwig, Elisabeth Mangold, Christoph Lange, Properties of permutation-based gene tests and controlling type 1 error using a summary statistic based gene test, BMC Genetics, 2013, 14, 1, 108

    CrossRef

  21. 21
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  22. 22
    Brooke L. Fridley, Steven Lund, Gregory D. Jenkins, Liewei Wang, A Bayesian Integrative Genomic Model for Pathway Analysis of Complex Traits, Genetic Epidemiology, 2012, 36, 4
  23. 23
    Prabhakar Chalise, Brooke L. Fridley, Comparison of penalty functions for sparse canonical correlation analysis, Computational Statistics & Data Analysis, 2012, 56, 2, 245

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  24. 24
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    CrossRef

  25. 25
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    CrossRef

  26. 26
    Victor M. Karpyak, Jennifer R. Geske, Colin L. Colby, David A. Mrazek, Joanna M. Biernacka, Genetic variability in the NMDA-dependent AMPA trafficking cascade is associated with alcohol dependence, Addiction Biology, 2012, 17, 4
  27. 27
    M. G. Dozmorov, L. R. Cara, C. B. Giles, J. D. Wren, GenomeRunner: automating genome exploration, Bioinformatics, 2012, 28, 3, 419

    CrossRef

  28. 28
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    CrossRef

  29. 29
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  30. 30
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    CrossRef

  31. 31
    Silviu-Alin Bacanu, On Optimal Gene-Based Analysis of Genome Scans, Genetic Epidemiology, 2012, 36, 4
  32. 32
    Prabhakar Chalise, Anthony Batzler, Ryan Abo, Liewei Wang, Brooke L. Fridley, Simultaneous Analysis of Multiple Data Types in Pharmacogenomic Studies Using Weighted Sparse Canonical Correlation Analysis, OMICS: A Journal of Integrative Biology, 2012, 16, 7-8, 363

    CrossRef

  33. 33
    Joanna M Biernacka, Gregory D Jenkins, Liewei Wang, Ann M Moyer, Brooke L Fridley, Use of the gamma method for self-contained gene-set analysis of SNP data, European Journal of Human Genetics, 2012, 20, 5, 565

    CrossRef

  34. 34
    Daniel J. Schaid, Jason P. Sinnwell, Gregory D. Jenkins, Shannon K. McDonnell, James N. Ingle, Michiaki Kubo, Paul E. Goss, Joseph P. Costantino, D. Lawrence Wickerham, Richard M. Weinshilboum, Using the gene ontology to scan multilevel gene sets for associations in genome wide association studies, Genetic Epidemiology, 2012, 36, 1
  35. 35
    Mary Helen Black, Richard M. Watanabe, A Principal Components-Based Clustering Method to Identify Variants Associated with Complex Traits, Human Heredity, 2011, 71, 1, 50

    CrossRef

  36. 36
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    CrossRef

  37. 37
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  38. 38
    Miao-Xin Li, Hong-Sheng Gui, Johnny S.H. Kwan, Pak C. Sham, GATES: A Rapid and Powerful Gene-Based Association Test Using Extended Simes Procedure, The American Journal of Human Genetics, 2011, 88, 3, 283

    CrossRef

  39. 39
    Brooke L Fridley, Christine Patch, Gene set analysis of SNP data: benefits, challenges, and future directions, European Journal of Human Genetics, 2011, 19, 8, 837

    CrossRef

  40. 40
    Jing He, Kai Wang, Andrew C Edmondson, Daniel J Rader, Chun Li, Mingyao Li, Gene-based interaction analysis by incorporating external linkage disequilibrium information, European Journal of Human Genetics, 2011, 19, 2, 164

    CrossRef

  41. 41
    Elizabeth C. LeRoy, Jason H. Moore, Chengcheng Hu, María Elena Martínez, Peter Lance, David Duggan, Patricia A. Thompson, Genes in the insulin and insulin-like growth factor pathway and odds of metachronous colorectal neoplasia, Human Genetics, 2011, 129, 5, 503

    CrossRef

  42. 42
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    CrossRef

  43. 43
    M. T. Salam, T. M. Bastain, E. B. Rappaport, T. Islam, K. Berhane, W. J. Gauderman, F. D. Gilliland, Genetic variations in nitric oxide synthase and arginase influence exhaled nitric oxide levels in children, Allergy, 2011, 66, 3
  44. 44
    Hyonho Chun, David H. Ballard, Judy Cho, Hongyu Zhao, Identification of association between disease and multiple markers via sparse partial least-squares regression, Genetic Epidemiology, 2011, 35, 6
  45. 45
    H. Eleftherohorinou, C. J. Hoggart, V. J. Wright, M. Levin, L. J. M. Coin, Pathway-driven gene stability selection of two rheumatoid arthritis GWAS identifies and validates new susceptibility genes in receptor mediated signalling pathways, Human Molecular Genetics, 2011, 20, 17, 3494

    CrossRef

  46. 46
    Jung-Ying Tzeng, Daowen Zhang, Monnat Pongpanich, Chris Smith, Mark I. McCarthy, Michèle M. Sale, Bradford B. Worrall, Fang-Chi Hsu, Duncan C. Thomas, Patrick F. Sullivan, Studying Gene and Gene-Environment Effects of Uncommon and Common Variants on Continuous Traits: A Marker-Set Approach Using Gene-Trait Similarity Regression, The American Journal of Human Genetics, 2011, 89, 2, 277

    CrossRef

  47. 47
    V. Shane Pankratz, Zhifu Sun, Jeremiah Aakre, Yan Li, Cassandra Johnson, Yolanda I. Garces, Marie C. Aubry, Julian R. Molina, Dennis A. Wigle, Ping Yang, Systematic Evaluation of Genetic Variants in Three Biological Pathways on Patient Survival in Low-Stage Non-small Cell Lung Cancer, Journal of Thoracic Oncology, 2011, 6, 9, 1488

    CrossRef

  48. 48
    Qianqian Peng, Jinghua Zhao, Fuzhong Xue, A gene-based method for detecting gene–gene co-association in a case–control association study, European Journal of Human Genetics, 2010, 18, 5, 582

    CrossRef

  49. 49
    Kai Wang, Mingyao Li, Hakon Hakonarson, Analysing biological pathways in genome-wide association studies, Nature Reviews Genetics, 2010, 11, 12, 843

    CrossRef

  50. 50
    E.A. Hibler, P.W. Jurutka, J.B. Egan, C. Hu, E.C. LeRoy, M.E. Martinez, P.A. Thompson, E.T. Jacobs, Association between polymorphic variation in VDR and RXRA and circulating levels of vitamin D metabolites, The Journal of Steroid Biochemistry and Molecular Biology, 2010, 121, 1-2, 438

    CrossRef

  51. 51
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  52. 52
    David H. Ballard, Judy Cho, Hongyu Zhao, Comparisons of multi-marker association methods to detect association between a candidate region and disease, Genetic Epidemiology, 2010, 34, 3
  53. 53
    Natsuhiko Kumasaka, Yumi Yamaguchi-Kabata, Atsushi Takahashi, Michiaki Kubo, Yusuke Nakamura, Naoyuki Kamatani, Establishment of a standardized system to perform population structure analyses with limited sample size or with different sets of SNP genotypes, Journal of Human Genetics, 2010, 55, 8, 525

    CrossRef

  54. 54
    Omar De la Cruz, Xiaoquan Wen, Baoguan Ke, Minsun Song, Dan L. Nicolae, Gene, region and pathway level analyses in whole-genome studies, Genetic Epidemiology, 2010, 34, 3
  55. 55
    Kari E. Roberts, Steven M. Kawut, Michael J. Krowka, Robert S. Brown, James F. Trotter, Vijay Shah, Inga Peter, Hocine Tighiouart, Nandita Mitra, Elizabeth Handorf, James A. Knowles, Steven Zacks, Michael B. Fallon, Genetic Risk Factors for Hepatopulmonary Syndrome in Patients With Advanced Liver Disease, Gastroenterology, 2010, 139, 1, 130

    CrossRef

  56. 56
    E. T. Jacobs, M. E. Martinez, P. T. Campbell, D. V. Conti, D. Duggan, J. C. Figueiredo, R. W. Haile, E. C. LeRoy, J. N. Poynter, P. A. Thompson, J. A. Baron, Genetic variation in the retinoid X receptor and calcium-sensing receptor and risk of colorectal cancer in the Colon Cancer Family Registry, Carcinogenesis, 2010, 31, 8, 1412

    CrossRef

  57. 57
    Lin S. Chen, Carolyn M. Hutter, John D. Potter, Yan Liu, Ross L. Prentice, Ulrike Peters, Li Hsu, Insights into Colon Cancer Etiology via a Regularized Approach to Gene Set Analysis of GWAS Data, The American Journal of Human Genetics, 2010, 86, 6, 860

    CrossRef

  58. 58
    Xi Chen, Lily Wang, Bo Hu, Mingsheng Guo, John Barnard, Xiaofeng Zhu, Pathway-based analysis for genome-wide association studies using supervised principal components, Genetic Epidemiology, 2010, 34, 7
  59. 59
    Tao Wang, Howard Jacob, Soumitra Ghosh, Xujing Wang, Zhao-Bang Zeng, A joint association test for multiple SNPs in genetic case-control studies, Genetic Epidemiology, 2009, 33, 2
  60. 60
    Clare C. Constantine, Greg J. Anderson, Chris D. Vulpe, Christine E. McLaren, Melanie Bahlo, Heng Lin Yeap, Dorota M. Gertig, Nicholas J. Osborne, Nadine A. Bertalli, Kenneth B. Beckman, Victoria Chen, Pavel Matak, Andrew T. McKie, Martin B. Delatycki, John K. Olynyk, Dallas R. English, Melissa C. Southey, Graham G. Giles, John L. Hopper, Katrina J. Allen, Lyle C. Gurrin, A novel association between a SNP in CYBRD1 and serum ferritin levels in a cohort study of HFE hereditary haemochromatosis, British Journal of Haematology, 2009, 147, 1
  61. 61
    Tao Wang, Gloria Ho, Kenny Ye, Howard Strickler, Robert C. Elston, A partial least-square approach for modeling gene-gene and gene-environment interactions when multiple markers are genotyped, Genetic Epidemiology, 2009, 33, 1
  62. 62
    M. Li, K. Wang, S. F. A. Grant, H. Hakonarson, C. Li, ATOM: a powerful gene-based association test by combining optimally weighted markers, Bioinformatics, 2009, 25, 4, 497

    CrossRef

  63. 63
    T. J. Jorgensen, I. Ruczinski, B. Kessing, M. W. Smith, Y. Y. Shugart, A. J. Alberg, Hypothesis-Driven Candidate Gene Association Studies: Practical Design and Analytical Considerations, American Journal of Epidemiology, 2009, 170, 8, 986

    CrossRef

  64. You have free access to this content64
    Kai Yu, Qizhai Li, Andrew W. Bergen, Ruth M. Pfeiffer, Philip S. Rosenberg, Neil Caporaso, Peter Kraft, Nilanjan Chatterjee, Pathway analysis by adaptive combination of P-values, Genetic Epidemiology, 2009, 33, 8
  65. 65
    Yan-feng Shen, Jun Zhu, Power analysis of principal components regression in genetic association studies, Journal of Zhejiang University SCIENCE B, 2009, 10, 10, 721

    CrossRef

  66. 66
    James R. Cerhan, Anne J. Novak, Zachary S. Fredericksen, Alice H. Wang, Mark Liebow, Timothy G. Call, Ahmet Dogan, Thomas E. Witzig, Stephen M. Ansell, Thomas M. Habermann, Neil E. Kay, Susan L. Slager, Risk of non-Hodgkin lymphoma in association with germline variation in complement genes, British Journal of Haematology, 2009, 145, 5
  67. 67
    Muhammad T. Salam, Talat Islam, W. James Gauderman, Frank D. Gilliland, Roles of arginase variants, atopy, and ozone in childhood asthma, Journal of Allergy and Clinical Immunology, 2009, 123, 3, 596

    CrossRef

  68. 68
    Carrie V. Breton, Hita Vora, Muhammad T. Salam, Talat Islam, Made Wenten, W. James Gauderman, David Van Den Berg, Kiros Berhane, John M. Peters, Frank D. Gilliland, Variation in theGST muLocus and Tobacco Smoke Exposure as Determinants of Childhood Lung Function, American Journal of Respiratory and Critical Care Medicine, 2009, 179, 7, 601

    CrossRef

  69. 69
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    CrossRef

  70. 70
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    CrossRef

  71. 71
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    CrossRef

  72. 72
    S. Leng, C. A. Stidley, A. M. Bernauer, M. A. Picchi, X. Sheng, M. A. Frasco, D. Van Den Berg, F. D. Gilliland, R. E. Crowell, S. A. Belinsky, Haplotypes of DNMT1 and DNMT3B are associated with mutagen sensitivity induced by benzo[a]pyrene diol epoxide among smokers, Carcinogenesis, 2008, 29, 7, 1380

    CrossRef

  73. 73
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  74. 74
    Mariza de Andrade, Andrew S. Allen, Summary of contributions to GAW15 Group 13: candidate gene association studies, Genetic Epidemiology, 2007, 31, S1
  75. 75
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