1 | Plant-insect herbivore-pesticide interactions | Adams et al. 2005 | Unstructured | Y | X | X | | | | N |

2 | Assessing ecological risk to night heron | An et al. 2006 | Matrix | Y | X | | | | | N |

3 | Application of individual growth and population models of *Daphnia pulex* to other daphnid species | Asaeda and Acharya 2000 | Stage structured | N | X | | X | X | | N |

4 | Logistic growth model and recovery times | Barnthouse 2004 | Unstructured | N | | | X | | | N |

5 | Impact of pesticides on lumbricids | 1996 | Structured (PDE), IBM | Y | X | X | X | | | N |

6 | Angling and life history effects on bluegill size structure | Beard and Essington 2000 | IBM | N | X | | X | | | N |

7 | Mosquitofish population dynamics | Beaudouin et al. 2008 | IBM | N | X | | X | | | N |

8 | Effects of toxic compounds on population dynamics of *Daphnia magna* | Billoir et al. 2007 | Matrix (DEB) | Y | X | | | | | N |

9 | PC-BEEPOP | Bromenshenk et al. 1991 | Stage structured | Y | X | X | X | | | N |

10 | Endocrine disrupting chemicals in perch populations | Brown et al. 2005 | Stage structured | Y | X | X | X | | | N |

11 | Synchronous versus asynchronous treatments for control of dispersing insect pests | Byers and Castle 2005 | Unstructured | Y | X | | X | | | Y |

12 | Mosquitofish responses to Genapol OXD-080 | Cabral et al. 2001 | Structured | Y | X | | X | | | N |

13 | Risk assessment on the basis of simplified life-history scenarios | Calow et al 1997 | Matrix | Y | X | | X | | | N |

14 | Life cycle testing and Leslie matrix | Chandler et al. 2004 | Matrix | Y | X | X | X | | | N |

15 | Food availability and *Chironomus riparius* | Charles et al. 2004 | Matrix (DEB) | N | X | | | | | N |

16 | Aggregation methods and toxicant effects in spatial systems | Chaumot et al. 2002 | Matrix | Y | X | | | | | Y |

17 | Farmed abalone exposed to waterborne zinc | 2004 | Matrix | Y | X | X | | | X | N |

18 | Slug IBM | Choi et al. 2006 | IBM | N | X | | X | | | Y |

19 | Effects of temperature and soil moisture on collembolan species | Choi et al. 2006a | Matrix | Y | X | X | X | | | N |

20 | Mark-recapture and simulation modeling of saddlebacks | 2002 | IBM | N | X | | X | | | N |

21 | Density-dependent dynamics in smallmouth bass populations | De Angelis et al. 1991 | IBM | N | X | | X | | | N |

22 | Demographic analysis of continuous-time life-history models | De Roos 2008 | Structured (Lotka's integral eq.) | N | X | | X | | | N |

23 | DEB and population effects of zinc-spiked sediments in a gastropod | Ducrot et al. 2007 | Matrix (DEB) | Y | X | | | | | N |

24 | Bayesian modeling of aphid dynamics | Fabre et al. 2006 | Unstructured | N | X | | | | | N |

25 | Chlorpyrifos in aquatic environments | Giesy et al. 1999 | Matrix | Y | X | X | X | | | N |

26 | GETLAUS01 | Gosselke et al. 2001 | Physiologically structured | N | X | | X | X | | N |

27 | Development and application of bioaccumulation models to assess persistent organic pollutant temporal trends in Arctic ringed seal (*Phoca hispida*) populations | Hickie et al. 2005 | IBM | N | | | | | X | N |

28 | RA of the Victorian southern rock lobster fishery | Hobday and Punt 2001 | Sex and size structured | N | X | | X | X | | N |

29 | Multiple endpoints in life-cycle toxicity | Jager et al. 2004 | Unstructured | Y | X | | | | | N |

30 | Two modes of action of cpf in the springtail *Folsomia candida* | Jager et al. 2007 | Structured (Euler-Lotka eq.) | Y | X | | | | | N |

31 | PCB effects on young-of-the-year largemouth bass | Jaworska et al. 1997 | IBM | Y | X | | | | | N |

32 | Estuarine striped bass population | Kimmerer et al. 2001 | Stage structured | Y | X | | X | X | | N |

33 | Insecticide effects on chrysomelid beetles | Kjaer et al. 1998 | Stage structured | Y | X | | | | | Y |

34 | Integrating DEB into matrix models | Klanjscek et al. 2006 | Matrix (DEB) | N | X | | | | | N |

35 | *Lumbricus rubellus* in a polluted field soil: possible consequences for the godwit | Klok et al. 2006 | Matrix (DEB) | Y | X | | | | | N |

36 | DEB and Bayesian approaches for *Dendrobaena**octaedra* | Klok et al. 2007 | Matrix (DEB) | Y | X | | | | | N |

37 | Toxicological effects on *Lumbricus rubellus* | 1996 | Matrix | Y | X | X | X | | | N |

38 | Environmental and chemical stressors on *Daphnia* | Koh et al 1997 | Physiologically structured | Y | X | X | | | | N |

39 | Mysid toxicity test data and population modeling techniques | Kuhn et al. 2000 | Matrix | Y | X | | | | | N |

40 | Hard clam susceptibility to Hg-stressed birnavirus | Liao and Yeh 2007 | Matrix with epidemiological SIM models | Y | X | | | | | N |

41 | Bioenergetics-based matrix population model of tilapia | Liao et al. 2006 | Matrix (DEB) | Y | X | | | | X | N |

42 | Establishing predicted NOECs for population-level ERA | Lin 2005 | Matrix | Y | X | | | | | N |

43 | DEBtox models in Leslie models | Lopes et al. 2005 | Matrix (DEB) | Y | X | | | | | N |

44 | Accumulation of PCBs by Lake Trout | Madenjian 1993 | IBM | Y | X | X | X | | X | N |

45 | Heavy-metal pollution of fish populations | Mastala et al. 1993 | Structured | N (only accumulation) | | | | | X | N |

46 | Endocrine disruptors and fathead minnow populations | Miller and Ankley 2004 | Matrix (with logistic eq.) | Y | X | X | X | | | N |

47 | Herring gull populations and DDT exposure | Nakamaru et al. 2002 | Matrix with canonical extinction model | Y | X | X | | | X | N |

48 | WORMDYN | Pelosi et al. 2008 | Matrix (Leslie) | N | X | | X | | | N |

49 | *Chironomus riparius* in ecotoxicological risk assessment | Pery et al. 2004 | Matrix (DEB) | Y | X | | | | | N |

50 | *Chironomus riparius* and heavy metals | Pery et al. 2006 | Unstructured (kinetics, DEB based) and matrix | Y | X | X | | | | N |

51 | IDamP | Preuss, Hammers-Wirtz, et al. 2009 | IBM | Y(see Case Studies) | X | X | X | | X | N |

52 | Modeling aquatic toxicity data | 2006 | Matrix | Y | X | X | | | | N |

53 | Diel vertical migration of *Daphnia* | Rinke and Petzold 2008 | IBM | N | X | | X | | | N |

54 | Temperature and food concentration effects on *Daphnia* | Rinke and Vijverberg 2005 | Physiologically structured | N | X | | X | | | N |

55 | Cadmium exposure of the freshwater gastropod, *Biomphalaria glabrata* | 2003 | Matrix | Y | X | X | | | | N |

56 | DANIO | Schäfers et al. 1993 | IBM | Y | X | X | X | | | N |

57 | GamMod | Schmidt 2003 | IBM | Y | X | | X | | | N |

58 | Population parameters for 3 salmon species | Spromberg and Meador 2006 | Matrix | Y | X | | X | | | N |

59 | MORPH | Stillman 2008 | IBM | N | X | | X | | | Y |

60 | Insect growth-regulating insecticides on honeybees | Thompson et al. 2005 | Stage structured | Y | X | | X | | | N |

61 | Insecticide-contaminated dung and the abundance and distribution of dung fauna | 2002 | Stage structured | Y | X | X | X | | | Y |

62 | Piscator - IBM to analyze dynamics of lake fish communities | van Nes et al. 2002 | IBM | N | X | | X | X | | N |

63 | CHARISMA | van Nes 2003 | IBM | N | X | | X | X | | Y |

64 | Sympatric populations of brown and rainbow trout | Van Winkle et al. 1998 | IBM | N | X | | X | | | Y |

65 | Behavior under food limitation and crowding and the effect on population cycling in *Daphnia* | Vanoverbeke 2008 | IBM | N | X | | X | | | N |

66 | The dynamics of pest-parasitoid-insecticide interactions | Waage et al. 1985 | Unstructured, matrix | Y | X | | X | X | | N |

67 | Population dynamics of thrips | Wang and Shipp 2001 | Physiologically structured | Y | X | X | X | | | N |

68 | Beyond just counting dead animals | 2000 | Matrix | Y | X | X | X | | | N |