Journal of Raman Spectroscopy

Cover image for Journal of Raman Spectroscopy

November 2009

Volume 40, Issue 11

Pages 1459–1700

  1. Rapid Communications

    1. Top of page
    2. Rapid Communications
    3. Research Articles
    4. Short Communications
    1. Towards a rational drug design: Raman micro-spectroscopy analysis of prostate cancer cells treated with an aqueous extract of Nerium Oleander (pages 1459–1460)

      A. Saha and V. V. Yakovlev

      Article first published online: 20 APR 2009 | DOI: 10.1002/jrs.2302

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      To test the hypothesis that a low concentration of an aqueous solution of Nerium Oleander extract affects the biochemical composition of cancerous cells, Raman spectra of those cells were collected and analyzed for different drug concentrations. The results indicate that Nerium Oleander alters the chemical composition of cancerous cells and can be potentially used as an alternative treatment of prostate cancer.

    2. Detection of small amounts of H2O in CO2-rich fluid inclusions using Raman spectroscopy (pages 1461–1463)

      Márta Berkesi, Károly Hidas, Tibor Guzmics, Jean Dubessy, Robert J. Bodnar, Csaba Szabó, Balázs Vajna and Toshiaki Tsunogae

      Article first published online: 1 SEP 2009 | DOI: 10.1002/jrs.2440

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      Raman spectroscopy at low (−100 °C) or high (100–200 °C) temperature is shown to be effective in detecting small amounts of H2O in CO2-rich deep lithospheric fluid inclusions, which have previously been thought to be water free.

  2. Research Articles

    1. Top of page
    2. Rapid Communications
    3. Research Articles
    4. Short Communications
    1. Raman spectroscopic study of the uranyl sulphate mineral jáchymovite (UO2)8(SO4)(OH)14· 13H2O (pages 1464–1468)

      Jiří Čejka, Ray L. Frost, Jiří Sejkora and Eloise C. Keeffe

      Article first published online: 23 FEB 2009 | DOI: 10.1002/jrs.2227

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      Raman spectra of jáchymovite, (UO2)8(SO4)(OH)14·13H2O, were studied, complemented with its infrared spectra, and compared with published Raman and infrared spectra of uranopilite, [(UO2)6(SO4)O2(OH)6(H2O)6]·6H2O.

    2. Effect of supplementary manganese on the sporulation of Bacillus endospores analysed by Raman spectroscopy (pages 1469–1477)

      S. Stöckel, S. Meisel, R. Böhme, M. Elschner, P. Rösch and J. Popp

      Article first published online: 29 APR 2009 | DOI: 10.1002/jrs.2292

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      The spectral differences in the Raman spectra of single endospores of six different Bacillus strains that were cultivated on normal nutritient media and media with supplementary divalent manganese as sporulation accelerator were analysed via a micro-Raman setup and subsequent chemometric analysis.

    3. Vibrational spectroscopy and DFT calculations of di-amino acid cyclic peptides. Part I: cyclo(Gly-Gly), cyclo(L-Ala-L-Ala) and cyclo(L-Ala-Gly) in the solid state and in aqueous solution (pages 1478–1497)

      Andrew P. Mendham, Trevor J. Dines, Martin J. Snowden, Babur Z. Chowdhry and Robert Withnall

      Article first published online: 27 MAY 2009 | DOI: 10.1002/jrs.2293

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      Experimental spectra (Raman and FTIR; protonated and deuterated) as well as DFT calculations (B3-LYP/cc-pVDZ) have been undertaken for three structurally related cyclic peptides exhibiting cis-conformation. Comparisons are made of the cyclic amide I/II bands with their linear counterparts. Band assignments have been made using calculated potential energy distributions.

    4. Vibrational spectroscopic studies of the structure of di-amino acid peptides. Part II: cyclo(L-Asp-L-Asp) in the solid state and in aqueous solution (pages 1498–1507)

      Andrew P. Mendham, Trevor J. Dines, Robert Withnall, John C. Mitchell and Babur Z. Chowdhry

      Article first published online: 27 MAY 2009 | DOI: 10.1002/jrs.2307

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      Protonated and N,O-deuterated Raman spectra in the solid and aqueous solution state, as well as FT-IR spectra (solid state), are reported. DFT calculations (B3-LYP/cc-pVDZ level) suggest a boat conformation for the DKP ring. Aided by normal coordinate analysis, comparisons of the cis amide vibrations of cyclo(L-Asp-L-Asp) are made with those of the trans counterpart.

    5. IR/Raman spectroscopy and DFT calculations of cyclic di-amino acid peptides. Part III: comparison of solid state and solution structures of cyclo(L-Ser-L-Ser) (pages 1508–1520)

      Andrew P. Mendham, Trevor J. Dines, M. J. Snowden, Robert Withnall and Babur Z. Chowdhry

      Article first published online: 27 MAY 2009 | DOI: 10.1002/jrs.2306

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      Experimental Raman (solid/aqueous samples) and FT-IR (solid state) spectra combined with high-level DFT calculations/normal coordinate analyses of protonated/deuterated samples shed light on band assignments for a cyclic peptide. Solid-state samples show characteristic amide I vibrations which are split; the cis amide I band is differentiated by its large deuterium shift of ∼30 cm−1.

    6. Raman spectroscopic study of the uranyl mineral natrouranospinite (Na2,Ca)[(UO2)(AsO4)]2· 5H2O (pages 1521–1526)

      Jiří Čejka, Jiří Sejkora, Ray L. Frost and Eloise C. Keeffe

      Article first published online: 3 MAR 2009 | DOI: 10.1002/jrs.2233

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      Raman spectra of natrouranospinite, were studied, complemented with its IR spectra, and compared with published Raman and infrared spectra of autunite-type minerals.

    7. Near-IR surface-enhanced Raman spectrum of lignin (pages 1527–1534)

      Umesh P. Agarwal and Richard S. Reiner

      Article first published online: 6 MAY 2009 | DOI: 10.1002/jrs.2294

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      Understanding wood and other biomass that are heterogeneous natural polymer composites of cellulose, lignin, and hemicellulose will lead to progress in a number of science and technology fields. This paper reports on the use of silver particles to successfully induce the surface-enhanced Raman scattering (SERS) effect in isolated and native state lignins.

    8. Raman spectroscopy of Cu doping in Zn1−xCoxO diluted magnetic semiconductor (pages 1535–1538)

      Luc Huy Hoang, Nguyen Thi Minh Hien, Nguyen Hoang Hai, Pham Van Hai, Nguyen The Khoi and In-Sang Yang

      Article first published online: 20 APR 2009 | DOI: 10.1002/jrs.2295

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      The room-temperature ferromagnetism and the Raman spectroscopy data of Cu-doped Zn1−xCoxO powders prepared by the sol–gel method are reported. The relative strength of the second-order LO peak to the first-order one in the Raman spectra, which is related to the carrier concentration, of Cu-doped Zn0.98Co0.02O powder is strongly correlated with the saturation magnetic moment of the system.

    9. Gold-coated zinc oxide nanowire-based substrate for surface-enhanced Raman spectroscopy (pages 1539–1545)

      Muhammad A. Khan, Timothy P. Hogan and B. Shanker

      Article first published online: 29 MAY 2009 | DOI: 10.1002/jrs.2296

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      Zinc oxide nanowires coated with a thin film of gold exhibit uniform and repeatable SERS enhancement factor of the order of 106. SERS enhancement shows strong dependence on the thickness of the gold film and the orientation of nanowires on the substrate.

    10. Raman spectroscopic study of the mixed anion sulphate–arsenate mineral parnauite Cu9[(OH)10|SO4|(AsO4)2]·7H2O (pages 1546–1550)

      Ray L. Frost, Jiří Sejkora, Jiří Čejka and Eloise C. Keeffe

      Article first published online: 3 MAR 2009 | DOI: 10.1002/jrs.2238

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      The mixed anion mineral parnauite Cu9[(OH)10|SO4|(AsO4)2]·7H2O has been studied by Raman spectroscopy. Characteristic bands associated with arsenate, sulphate and hydroxyl units are identified. A comparison of the Raman spectra with that of other arsenate minerals is made.

    11. Density functional theory calculations and vibrational spectra of 2-bromo-4-chloro phenol and 2-chloro-4-nitro phenol (pages 1551–1556)

      V. Krishnakumar, N. Jayamani, R. Mathammal and K. Parasuraman

      Article first published online: 6 MAY 2009 | DOI: 10.1002/jrs.2297

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      Density functional theory calculations and vibrational spectra of 2-bromo 4-chloro phenol and 2-chloro 4-nitro phenol were carried out using B3LYP/6-31 G** basis set. The calculated spectra were obtained from the calculated intensities. The simulated and the experimental spectra agree well.

    12. Surface-enhanced Raman spectroscopy of indanthrone and flavanthrone (pages 1557–1563)

      Jingjing Chang, Maria Vega Cañamares, Metin Aydin, Wilfried Vetter, Manfred Schreiner, Weiqing Xu and John R. Lombardi

      Article first published online: 12 JUN 2009 | DOI: 10.1002/jrs.2298

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      The normal Raman and surface-enhanced Raman scattering (SERS) spectra of flavanthrone and indanthrone are obtained at several excitation wavelengths. The spectral assignments are aided by density functional calculations. Since both molecules have very high symmetry (C2h) including a center of inversion, we expect that the modes of u symmetry will be forbidden in the normal Raman spectrum.

    13. Raman and surface-enhanced Raman studies of α-aminophosphinic inhibitors of metalloenzymes (pages 1564–1571)

      E. Podstawka, M. Dra̧g and J. Oleksyszyn

      Article first published online: 28 APR 2009 | DOI: 10.1002/jrs.2299

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      Here we report the nature of new di-α-amino (L1L3) and α-amino-α-hydroxyphosphinic (L4L6) acids non-adsorbed and adsorbed on a colloidal silver surface by means of FT-RS and SERS, respectively. Examining the enhancement, shift in wavenumbers, and changes in breadth of the bands due to the adsorption process, we show that the tilted compounds interact with the colloidal silver substrate mainly through the benzene ring, amino group, and phosphinic moiety.

    14. SERS as a probe for adsorbate orientation on silver nanoclusters (pages 1572–1577)

      Y. Fleger, Y. Mastai, M. Rosenbluh and D. H. Dressler

      Article first published online: 8 MAY 2009 | DOI: 10.1002/jrs.2300

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      Here we show that wavenumber shifts in the SERS spectrum can be correlated to specific bonding geometries on metallic surfaces. The relationship between molecular configuration and the specific binding mechanisms inferred from the wavenumber shifts enables us to identify surface geometries of hydroxybenzoic acid isomers adsorbed on metallic surfaces, solely by the SERS spectrum. This method may be implemented to several other molecules adsorbed on metallic surfaces.

    15. Adsorbed states of substituted α-aminophosphinic acids on a silver electrode surface: comparison with a colloidal silver substrate (pages 1578–1584)

      Edyta Podstawka, Andrzej Kudelski, M. Dra̧g, J. Oleksyszyn and Leonard M. Proniewicz

      Article first published online: 28 APR 2009 | DOI: 10.1002/jrs.2301

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      We investigated the interfacial structures of various aromatic di-α-amino (L1L3) and α-amino-α-hydroxyphosphinic (L4L6) acids immobilized onto an electrochemically roughened silver electrode using SERS. These structures were compared to those on a colloidal silver surface to determine the relationship between adsorption strength and geometry.

    16. FT-Raman, FTIR and density functional theory studies of a hydrogen-bonded formamide:pyridine complex (pages 1585–1590)

      Filipe S. F. Jacinto, Leonardo J. A. Siqueira and Wagner A. Alves

      Article first published online: 5 JUN 2009 | DOI: 10.1002/jrs.2303

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      Raman and IR spectra of formamide (FA) and pyridine (Py) mixtures exhibit two new bands at 996 and 1587 cm−1, which have been assigned to a hydrogen-bonded Py complex. The latter band has been reported for the first time in the literature. In addition, the experimental data on the wavenumber shifts and stoichiometry of the 1:1 FA:Py complex are very well supported by density functional theory (DFT).

    17. Study of the vibrational spectra of (CH3)3GeCl from experimental and DFT calculations (pages 1591–1598)

      María Lorena Roldán, Silvia Antonia Brandán, Amparo Navarro and Aída Ben Altabef

      Article first published online: 27 APR 2009 | DOI: 10.1002/jrs.2304

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      New infrared and Raman spectra were measured for the clorotrimethylgermane (CTMG) to complete the assignment for its fundamental modes. The C-H vibrational modes were resolved into their components with the aid of the low-temperature infrared techniques together with the FSD on the Raman spectra.

    18. Structure and vibrational analysis of 1-hydroxy naphthalene based on density functional theory calculations (pages 1599–1604)

      V. Krishnakumar and R. Mathammal

      Article first published online: 26 MAY 2009 | DOI: 10.1002/jrs.2305

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      The spectra were interpreted with the help of normal coordinate analysis (NCA) following full structure optimization and force field calculations based on the density functional theory (DFT) using the standard B3LYP/6-31G** method and basis set combination.

    19. Identification of hydrogen bond modes in polarized Raman spectra of single crystals of α-oxalic acid dihydrate (pages 1605–1614)

      Vlasta Mohaček-Grošev, Jože Grdadolnik, Jernej Stare and Dušan Hadži

      Article first published online: 27 MAY 2009 | DOI: 10.1002/jrs.2308

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      Oxalic acid dihydrate, (COOH)2 · 2H2O, is one of the rare examples of a system with strong hydrogen bonding where the acidic OH stretching vibration, that falls below 2000 cm−1, is clearly visible in the Raman spectra.

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    20. DFT, FT-Raman, FT-IR and NMR studies of 2-fluorophenylboronic acid (pages 1615–1623)

      Yusuf Erdogdu, M. Tahir Güllüoǧlu and Mustafa Kurt

      Article first published online: 12 JUN 2009 | DOI: 10.1002/jrs.2309

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      The experimental and theoretical vibrational spectra of 2-fluorophenylboronic acid (abbreviated as 2fpba) were studied. The Fourier transform Raman and Fourier transform infrared spectra of the 2fpba molecule were recorded in the solid phase. The structural and spectroscopic analysis of the molecule was made by using Hartree-Fock and density functional harmonic calculations. For the title molecule, only one form was found most stable structure by using B3LYP level with the 6-31++G(d,p) basis set. The 1H and 13C nuclear magnetic resonance (NMR) chemical shifts of the 2fpba molecule were calculated using the Gauge-Invariant- atomic Orbital (GIAO) method in DMSO solution using IEF-PCM model and compared with the experimental data.

    21. Inclusion compounds of phenol derivatives with cyclodextrins: a combined spectroscopic and thermal analysis (pages 1624–1633)

      Mariana Sardo, Ana M. Amado and Paulo J. A. Ribeiro-Claro

      Article first published online: 26 MAY 2009 | DOI: 10.1002/jrs.2310

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      Raman spectroscopy, ab initio calculations, DSC and TG analysis were combined to investigate the inclusion process of some phenol derivatives with cyclodextrins. In the case of αCD inclusion compounds, unusual stoichiometries were obtained: 1:2 and 2:3 were observed for the meta substituted phenols. The Raman spectra reveal the band splitting of several modes, consistent with the existence of two guest molecules in different chemical environments: included in the CD cavity (A) and outside the cavity (B).

    22. Monitoring the synthesis of new polymer nanocomposites based on different polyhedral oligomeric silsesquioxanes using Raman spectroscopy (pages 1634–1640)

      Nicoleta Mihaela Sulca, Adriana Lungu, Sorina Alexandra Garea and Horia Iovu

      Article first published online: 29 APR 2009 | DOI: 10.1002/jrs.2311

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      Urethane dimethacrylate (UDMA) and polyhedral oligomeric silsesquioxane (POSS) networks were synthesized using three different types of POSS, two monofunctional POSS (1-propylmethacrylate)-heptaisobutyl substituted (HISO-POSS) and heptacyclopentyl-octasiloxan-1-yloxy) dimethylsilyl] propyl methacrylate (CPENTYL-POSS) and one octafunctional POSS-methacryl substituted (MA-POSS). The cross-linking process was studied by dispersive Raman spectroscopy, showing the influence of temperature, POSS concentration and type against conversion.

    23. Raman and infrared analysis of glues used for pottery conservation treatments (pages 1641–1644)

      Magali Asquier, Philippe Colomban and Véronique Milande

      Article first published online: 11 MAY 2009 | DOI: 10.1002/jrs.2312

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      Sixteen pottery artefacts restored during the 19th and 20th centuries at the Musée National de Céramique in Sèvres have been analysed. IR and Raman spectra were obtained for all ancient glue residues but among the 16 analysed items, only 7 adhesives have been identified unambiguously and an assignment proposed for 4 others solely on the basis of the Raman signature.

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      Rapid outdoor non-destructive detection of organic minerals using a portable Raman spectrometer (pages 1645–1651)

      J. Jehlička, P. Vítek, H. G. M. Edwards, M. Hargreaves and T. Čapoun

      Article first published online: 8 MAY 2009 | DOI: 10.1002/jrs.2313

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      Raman spectra of crystalline salts of carboxylic acids—whewellite and mellite, as well as of aromatic mineral idrilite and amorphous fossil resin were recorded using a portable instrument. All spectra were obtained using 785-nm diode excitation. Obtained results document well that portable Raman instruments can be considered as excellent tools for field geological or exobiological applications.

    25. Raman investigations of TiO2 nanotube substrates covered with thin Ag or Cu deposits (pages 1652–1656)

      A. Roguska, A. Kudelski, M. Pisarek, M. Lewandowska, M. Dolata and M. Janik-Czachor

      Article first published online: 26 MAY 2009 | DOI: 10.1002/jrs.2314

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      This article is devoted to the possibility of strong enhancing of Raman signals by Ag or Cu clusters deposited on TiO2/Ti self-organized nanotubes. It was found that the SERS spectra measured for pyridine adsorbed on the bulk silver substrate were significantly different than the spectra measured on the TiO2 nanotube/Ti substrates covered with an Ag layer.

    26. Molecular structure, NMR and vibrational spectral analysis of 2,4-difluorophenol by ab initio HF and density functional theory (pages 1657–1663)

      M. K. Subramanian, P. M. Anbarasan and S. Manimegalai

      Article first published online: 8 MAY 2009 | DOI: 10.1002/jrs.2315

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      We have undertaken a thorough vibrational analysis for 2,4-difluorophenol along with ab initio HF and DFT calculations, due to low toxicity and wide-ranging applications of fluorine derivatives of phenols. The theoretically computed value by B3LYP/6-311G(d,p) level shows at (1) 3711 cm−1 (mode no. 33) due to OH in-plane bending vibration in phenols, and O-H out-of-plane bending vibration (mode no.14) at (2) 780/773 cm−1 by HF and B3LYP method, and shows good agreement with literature as well as experimental observation.

    27. Yellow pigments in painting: characterisation and UV laser-induced modifications (pages 1664–1667)

      S. Acquaviva, P. Baraldi, E. D'Anna, M. L. De Giorgi, A. Della Patria, L. Giotta, S. Omarini and R. Piccolo

      Article first published online: 14 APR 2009 | DOI: 10.1002/jrs.2316

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      Yellow inorganic pigments in egg yolk tempera were studied to assess the effects of UV-pulsed-laser irradiations. The effects on natural earths could be partially connected to the dehydration of goethite, along with its phase transition to hematite and/or magnetite. Moreover, for all the investigated pigments, laser irradiation induced photochemical modifications in the binding medium.

    28. A resonance Raman spectroscopic investigation into the effects of fixation and dehydration on heme environment of hemoglobin (pages 1668–1674)

      Mehdi Asghari-Khiavi, Adam Mechler, Keith R. Bambery, Don McNaughton and Bayden R. Wood

      Article first published online: 11 MAY 2009 | DOI: 10.1002/jrs.2317

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      The vibrational spectroscopic data show that dehydration of erythrocytes results in a change of the heme environment and the formation of a six coordinate low-spin derivative of hemoglobin (Hb), hemi(o)chrome. Whereas fixation of erythrocytes in precipitating fixatives changes Hb to hemichrome, cross-linking fixatives initially maintain Hb in the oxy state but gradually oxidizes it to the met form.

    29. Vibrational assignments and electronic structure calculations for 6-thioguanine (pages 1675–1681)

      S. Gunasekaran, S. Kumaresan, R. Arunbalaji, G. Anand, S. Seshadri and S. Muthu

      Article first published online: 10 JUL 2009 | DOI: 10.1002/jrs.2318

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      The Fourier transform Raman and infrared spectra of thioguanine have been recorded. Ab initio and density functional computations of the vibrational (IR) spectrum, the molecular geometry, HOMO–LUMO energy gaps and polarizabilities were studied. On the basis of the comparison between calculated and experimental results and the comparison with related molecules, assignments of fundamental vibrational modes are examined. The observed and simulated spectra were found to be well comparable. The electronic transition energies and intensities of spectral lines were carried out using TDDFT and ZINDO methods.

    30. Improved performances on surface-enhanced Raman scattering based on electrochemically roughened gold substrates modified with SiO2 nanoparticles (pages 1682–1686)

      Yu-Chuan Liu, Chung-Chin Yu and Ting-Chu Hsu

      Article first published online: 10 AUG 2009 | DOI: 10.1002/jrs.2319

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      Experimental results indicate that the SiO2-modified roughened Au substrate can resist the aging in an atmosphere of 50% RH and 20% (v/v) O2 at 30 °C. Solid and open triangles represent R6G adsorbed on unmodified and modified Au substrates, respectively.

    31. Structural modifications in metal complexes of a plant metallothionein caused by reductive radical stress: a Raman study (pages 1687–1693)

      Armida Torreggiani, Jordi Domènech and Anna Tinti

      Article first published online: 11 MAY 2009 | DOI: 10.1002/jrs.2328

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      Zn(II) and Cd(II) complexes of a plant metallothionein belonging to the cork oak (Quercus Suber) were undergone to reductive radical stress and analysed by Raman spectroscopy. Sulfur-containing residues resulted to be selectively attacked by radicals and participation of His to metal coordination became necessary for protein stabilization after radical stress. The radical-induced effects were dependent on the divalent metal bound.

    32. Formation and Raman scattering of seed-like ZnO nanostructure (pages 1694–1697)

      Shih-Shou Lo, Dison Huang,, Chun-Hsiang Tu and Der-Jun Jan

      Article first published online: 26 MAY 2009 | DOI: 10.1002/jrs.2329

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      This work demonstrates a seed-like ZnO nanostructure that is aggregated with nano-entities using the colloid chemical method. The formation mechanism and optical properties of the ZnO nanostructure are studied. The X-ray diffraction spectrum indicates that the ZnO nanostructures are of polycrystalline pure wurtzite phase. Multiphonon processes in the nanostructure are identified from the Raman scattering spectra in the spectral range 300–2000 cm−1. A strong violet photoluminescence band emission was visible in the room temperature photoluminescence spectra. This work determines the quality of such crystals and extends the optical applications of ZnO nanostructures.

  3. Short Communications

    1. Top of page
    2. Rapid Communications
    3. Research Articles
    4. Short Communications
    1. Vibrational spectra of the layered monofluorophosphate (V), NH4Ag3(PO3F)2 (pages 1698–1700)

      Enrique J. Baran and Matthias Weil

      Article first published online: 30 SEP 2009 | DOI: 10.1002/jrs.2461

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      The powder Fourier-transform (FT) infrared (IR) and Raman spectra of the recently characterized NH4Ag3(PO3F)2 were recorded and are discussed with a site-symmetry analysis based on its known structural data. Some comparisons are made with the solution spectra of the PO3F2− anion and with those of crystalline Ag2PO3F.

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